Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01403 ATGGTTACAGACCTGGAAATATCGCAAGCCGTACAATCCCTCTTCCGGGAATCAAACCACAGAAGAACCTTCAACACCTTAAACGACATCGTTCAGGAGCTTCAAGCCAAGCTCGGAGTCGACCTCACCTACAAGGTCGACCTCATCACTGCCCAGATCAACATTCTCTTAGGATCTCACCCACCGCAACCGACGCAGCCGCAGCAGCACCCAAGGCCACTGCTGCAGCCTCAGTCTCAGCTTCAACCACCTCCCAAGGACCATTTTGCCCTTCATCAAAATCCTAATTTTCAGGCTGCTACTATCCCTCTTTCTTCCGCACTTCAGAACTTCCCCTCCCATCATGCAACGGTTAAAGTCGATGCTGCCGTAGCTGCTGACGGCACTGGTTCCGAAGCTACTGCCAATGCGGCCGCGGAAGTCCCCAAGGAGAGTACTCAAATTAAGGCAAAGAGAAGAGGTGGTCCAGGAGGTCTCAACAAACTTTGTGGTGTTTCACCTGAACTTCAGGCCATTGTTGGCCAGCCAGCACTGCCGAGGACTGAGATTGTTAAGCAATTGTGGGCTTACATAAGGAAAAACAATCTCCAAGATCCTAGTAACAGAAGGAAAATAATTTGCAATGAGGAGTTGCGTGTAGTATTTGAGACAGATTGTACTGATATGTTCAAGATGAATAAGTTGCTAGCTAAGCACATCATCCCGCTTGAATCAACAAAACAGCCGGATCCAAAGAAGCAGAAGGTAGATACCGAGTCTGGAACAGAAAGTACGGAACCTGCTCCTACTCCTGCTCCTTCTGTATTAATATCAGAAGCACTCGCTAACGTTTTTGGCATTAGTGAAAGGGAGATGCTTCAGAACGAGGTTTTAGGACGCATCTGGAAATATATAAAGGTCAACCGTCTAGAGGATCCTGTAAATCCCATGGCAATTATGTGTGATCCAAAGCTCCGAGATCTCTTTGGCTGTGAAAGCATTTCAGTATTAGGTATACCAGAACTTCTGGGTCGTCATCATATATTCAGGAGATCATGA 1038 0.4711 MVTDLEISQAVQSLFRESNHRRTFNTLNDIVQELQAKLGVDLTYKVDLITAQINILLGSHPPQPTQPQQHPRPLLQPQSQLQPPPKDHFALHQNPNFQAATIPLSSALQNFPSHHATVKVDAAVAADGTGSEATANAAAEVPKESTQIKAKRRGGPGGLNKLCGVSPELQAIVGQPALPRTEIVKQLWAYIRKNNLQDPSNRRKIICNEELRVVFETDCTDMFKMNKLLAKHIIPLESTKQPDPKKQKVDTESGTESTEPAPTPAPSVLISEALANVFGISEREMLQNEVLGRIWKYIKVNRLEDPVNPMAIMCDPKLRDLFGCESISVLGIPELLGRHHIFRRS 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01403 345 CDD SWIB_like 270 339 - -
Bach12g01403 345 ProSiteProfiles SWIB/MDM2 domain profile. 158 235 IPR003121 -
Bach12g01403 345 Pfam SWIB/MDM2 domain 163 233 IPR003121 -
Bach12g01403 345 Pfam SWIB/MDM2 domain 270 339 IPR003121 -
Bach12g01403 345 Pfam DEK C terminal domain 2 56 IPR014876 -
Bach12g01403 345 SMART swib_2 159 238 IPR019835 -
Bach12g01403 345 SMART swib_2 267 345 IPR019835 -
Bach12g01403 345 SUPERFAMILY SWIB/MDM2 domain 152 238 IPR036885 -
Bach12g01403 345 MobiDBLite consensus disorder prediction 59 86 - -
Bach12g01403 345 CDD SWIB-MDM2_like 163 233 - -
Bach12g01403 345 ProSiteProfiles SWIB/MDM2 domain profile. 263 342 IPR003121 -
Bach12g01403 345 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D 243 339 - -
Bach12g01403 345 MobiDBLite consensus disorder prediction 239 265 - -
Bach12g01403 345 MobiDBLite consensus disorder prediction 239 253 - -
Bach12g01403 345 Gene3D SWIB/MDM2 domain 154 242 IPR036885 -
Bach12g01403 345 Gene3D SWIB/MDM2 domain 263 344 IPR036885 -
Bach12g01403 345 SUPERFAMILY SWIB/MDM2 domain 268 340 IPR036885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01403 Bach-Chr12 9942214 9944352 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Bach12g01403 SWIB 1e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01403 - - gmx:100801960 428.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g01403 12 9942214 9944352 Bach12g01403 12 9942214 9944352 ECH