Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01350 AAAAAACCGAAAACCACCGGCGAGCCACTTTCTCTCCTATAAACCCTAAACCCTAGTTCATTCTGAAGAAGAAGTTCAGTCAAACGACAATCAGGCTTCTGCAGTCTAGAATAGTAACTGTTCTTATACTTTAAGAGCTGCAATGGCCGCTGCGTCACTAAACAAGAAGAAAGCTTCTAAGTCCCAGAAAGCTCACCCAAAAAAGAAGCAAAAGAATGAACTTTTCACTCCTAAAGACGCAAAGCTAAATGAAATTTCAGACCATTCAGACGATGAAAATGAAGAAACATTGGGTCAAGAAGATACTGAAGGAGATGAACCAGGGTGTGACTCTGGTTCTGCTGAATTTTCTTCTGATGGTGATAATCCCTTTACTGACGATTTCCTTCAAGGAAATGATGATGAAGAGAGAGGTTCAGCTTCTGATTCTGGTTCTGATTCTGATGATTATCATGATATCGAAAAGAAGTCTAGAGCTATTGATGAAGAAACGGAGAAAAGAAAAAAAGAAGCAGAGGAAGAGCTAAAGCTTAACTTGGAAGAAGAATCTGATGAATTTAGACTGCCTACGAAGGAGGAGCTTGAAGAAGAGGCTCTACGCCCACCTGATCTTCCAAATCTCCAAAGGAGAATTAAAGAGATTGTTAGAGTTCTTTCAAATTTCAAGTCTTTGAAGCAAGAAGGTTCGACAAGGAAGGATTACGTTGAGCAGCTAAAGAAGGATATATCCTCATACTATGGCTACAACGAGTTCCTAACTGGGGCTTTAGTGGAGATGTTTCCTGTTGTTGAGCTTATGGAATTAATTGAAGCCTTTGAGAAACCTCGGCCAATTTGTCTACGCACTAACACTTTGAAGACACGCAGACGAGACTTGGCAGATGTTTTGATAAATAGAGGAGTAAATCTAGATCCTTTAAGCAAATGGTCAAAAGTTGGACTAGTTGTGTATGATTCTCAAGTACCAATTGGAGCCACTCCTGAGTATATGGCTGGATTCTACATGCTCCAAAGTGCAAGTTCTTTTTTGCCTGTGATGGCCTTGGCTCCTCAAGAGAAGGAACGAATTGTTGATATGGCTGCTGCACCTGGTGGTAAAACAACTTACATTGCTGCTCTTATGAAAAATACCGGTATAATTTTTGCAAATGAAATGAAGGTGCCACGGCTTAAGTCATTAACTGCAAATTTACATCGTATGGGGGCATCAAACACCGTAGTCTGTAACCATGATGGAAAGGAGCTTCCGAAGGTTTTGGGTCTCAACACTTTTGATAGAGTACTACTGGACGCCCCATGCAGTGGGACTGGGGTTATATCCAAAGATGAGTCTGTTAAGACCTCTAAAAGTGCAGAAGATATACAGAAATGTGCCCATTTGCAGAAGCAACTGATTCTGGCGGCAATTGACATGGTGGATGCTACTTCCAAATCCGGAGGGTACATTGTTTACTCCACATGTTCCATCATGGTTGCTGAGAACGAAGCAGTTATCGATTATGCACTTAAAAATAGGGATGTTAAACTTGTGCCTTGTGGACTTGACTTTGGGCGTCCAGGGTTTATAAAGTTCAGGGAACAACGTTTTCACCCTTCTCTAGAAAAGACAAGGCGCTTTTATCCTCATGTACACAACATGGATGGATTTTTTGTTGCAAAGTTAAAAAAAATGAGCAACTCAAAGCCAACTGCTAAACCATCAGAACCAGTGGCAAGGGAGGAAGAAGCTGCGGTGCCTGGAAACGAAAAGGAGGATACAGAACGTGCGAAGGCTGCAAAGGAAAAGGAGAAAGAAGGTGCAAAGCCTACAAAAAGAAAGGAGACTCTAAGTAATGGCGTGAAAGAAAGCAGCAAAGAAGCATCTGCATCCAAGTCCAAGAAGAGGAAGAGAAGGACATTTCCATCTAAGGAGGAAATCTCAAAACTCAGGGAGGAGAAGAGAAGAGCTATAAGAGAAAAGAAAAAAAAGAAGGGTAGAAGCAACACAGACTGAAAATGGAGAATGACCAGTGGCGGTGCTAGTCACATGCAAAACCAATTTTGAAGATTTTTGTTTATTTCGTAAATGTATTTAATATTAAATTTTGTATCATTACTAATATAATTATAACGTGCTAATCGATTGTTATTTATTGAAAGCGAC 2143 0.4055 MAAASLNKKKASKSQKAHPKKKQKNELFTPKDAKLNEISDHSDDENEETLGQEDTEGDEPGCDSGSAEFSSDGDNPFTDDFLQGNDDEERGSASDSGSDSDDYHDIEKKSRAIDEETEKRKKEAEEELKLNLEEESDEFRLPTKEELEEEALRPPDLPNLQRRIKEIVRVLSNFKSLKQEGSTRKDYVEQLKKDISSYYGYNEFLTGALVEMFPVVELMELIEAFEKPRPICLRTNTLKTRRRDLADVLINRGVNLDPLSKWSKVGLVVYDSQVPIGATPEYMAGFYMLQSASSFLPVMALAPQEKERIVDMAAAPGGKTTYIAALMKNTGIIFANEMKVPRLKSLTANLHRMGASNTVVCNHDGKELPKVLGLNTFDRVLLDAPCSGTGVISKDESVKTSKSAEDIQKCAHLQKQLILAAIDMVDATSKSGGYIVYSTCSIMVAENEAVIDYALKNRDVKLVPCGLDFGRPGFIKFREQRFHPSLEKTRRFYPHVHNMDGFFVAKLKKMSNSKPTAKPSEPVAREEEAAVPGNEKEDTERAKAAKEKEKEGAKPTKRKETLSNGVKESSKEASASKSKKRKRRTFPSKEEISKLREEKRRAIREKKKKKGRSNTD 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01350 616 MobiDBLite consensus disorder prediction 520 566 - -
Bach12g01350 616 Gene3D Sun protein; domain 3 187 294 - -
Bach12g01350 616 Coils Coil 589 612 - -
Bach12g01350 616 Pfam N-terminal domain of 16S rRNA methyltransferase RsmF 217 294 IPR031341 -
Bach12g01350 616 MobiDBLite consensus disorder prediction 585 600 - -
Bach12g01350 616 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 194 509 IPR029063 -
Bach12g01350 616 ProSitePatterns NOL1/NOP2/sun family signature. 377 388 IPR018314 GO:0003723|GO:0008168
Bach12g01350 616 Gene3D Vaccinia Virus protein VP39 297 612 IPR029063 -
Bach12g01350 616 PRINTS RNA (C5-cytosine) methyltransferase signature 432 448 IPR023267 GO:0001510
Bach12g01350 616 PRINTS RNA (C5-cytosine) methyltransferase signature 281 295 IPR023267 GO:0001510
Bach12g01350 616 PRINTS RNA (C5-cytosine) methyltransferase signature 310 320 IPR023267 GO:0001510
Bach12g01350 616 PRINTS RNA (C5-cytosine) methyltransferase signature 378 390 IPR023267 GO:0001510
Bach12g01350 616 PRINTS RNA (C5-cytosine) methyltransferase signature 492 509 IPR023267 GO:0001510
Bach12g01350 616 MobiDBLite consensus disorder prediction 83 154 - -
Bach12g01350 616 MobiDBLite consensus disorder prediction 42 61 - -
Bach12g01350 616 PRINTS RNA (C5-cytosine) methyltransferase NOP2 subfamily signature 184 204 IPR023273 GO:0008168
Bach12g01350 616 PRINTS RNA (C5-cytosine) methyltransferase NOP2 subfamily signature 240 253 IPR023273 GO:0008168
Bach12g01350 616 PRINTS RNA (C5-cytosine) methyltransferase NOP2 subfamily signature 217 229 IPR023273 GO:0008168
Bach12g01350 616 FunFam Ribosomal RNA methyltransferase Nop2 188 294 - -
Bach12g01350 616 MobiDBLite consensus disorder prediction 1 154 - -
Bach12g01350 616 NCBIfam NOL1/NOP2/sun family putative RNA methylase 233 509 IPR011023 GO:0003723|GO:0006396|GO:0008757
Bach12g01350 616 Coils Coil 106 138 - -
Bach12g01350 616 PANTHER NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 103 513 IPR023267 GO:0001510
Bach12g01350 616 MobiDBLite consensus disorder prediction 21 41 - -
Bach12g01350 616 Pfam 16S rRNA methyltransferase RsmB/F 298 508 IPR001678 GO:0008168
Bach12g01350 616 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 221 510 IPR001678 GO:0008168
Bach12g01350 616 MobiDBLite consensus disorder prediction 512 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01350 Bach-Chr12 9494631 9499849 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01350 K14835 - qsa:O6P43_013526 835.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g01350 12 9494631 9499849 Bach12g01350 12 9494631 9499849 ECH