Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g01041 ATGGACAATTCCACCCAAGAATCCTACCTCAGATCCGAGAATTCTGTAACCTATGAGTCCCCTTACCCTCTTTACGCCATGGCCATCTCTTCCACCCCTTCCATTCCCTCTCACAGCCAGCGTATAGCAGTTGGTAGCTTTATAGAAGAGTGCACAAACCGCGTTGATATCCTCTCCTTCAACCCTGACACGCTCACCATTAGAGCCCAACCTTCCCTCTCCTTGGACCACCCGTACCCACCCACCAAGCTAATGTTCCACCCTAACGCCCACTCTTCCCTCCAAAAGTCCTCCTCCGACCTCCTCGCTACGTCCGGTGACTATCTCCGCCTCTGGGAAGTTCGGGAAGATTCCGTCGAGACAATTTCACTCCTCAACAATAGCAAGAGCAGCGAGTTCTGTGCCCCTTTGACCTCCTTTGATTGGAACGAAATTGAGCCCAAGAGAATTGGGACTTCAAGCATTGACACTACTTGTACCATTTGGGATATTGAAAAGGGGGTTGTTGAAACTCAGCTGATTGCCCACGATAAAGAGGTTTACGATATTGCTTGGGGTGAAGCTAGAGTCTTTGCATCTGTTTCTGCTGATGGTTCTGTTAGAATATTCGACCTGAGGGACAAGGAGCACTCCACGATTATATACGAGAGTCCGCAACCAGATACCCCTTTACTTAGACTGGCTTGGAATAAGCAGGATTTGAGGTACATGGCCACCATTTTGATGGACAGCAATAAAGTTGTGATTTTGGATATAAGATCTCCAACGATGCCTGTGGCGCTGTTGGAGAGGCACCGTGCTAGTGTCAACGCTATTGCTTGGGCTCCCCAGAGTTCTAGGCACATTTGTTCGGCGGGGGATGATACGGAGGCTCTTGTTTGGGAATTGCCAACTGTGGCTGGACCGAATGGGATTGATCCCATGTGCATGTATTCTGCTGGTTGTGAAATTAACCAACTTCAATGGTCTGCTTCTCAGCCTGACTGGATTGCCATTGCTTTTGCGAACAAGATGCAGCTTTTGAAGGTTTGA 1032 0.4884 MDNSTQESYLRSENSVTYESPYPLYAMAISSTPSIPSHSQRIAVGSFIEECTNRVDILSFNPDTLTIRAQPSLSLDHPYPPTKLMFHPNAHSSLQKSSSDLLATSGDYLRLWEVREDSVETISLLNNSKSSEFCAPLTSFDWNEIEPKRIGTSSIDTTCTIWDIEKGVVETQLIAHDKEVYDIAWGEARVFASVSADGSVRIFDLRDKEHSTIIYESPQPDTPLLRLAWNKQDLRYMATILMDSNKVVILDIRSPTMPVALLERHRASVNAIAWAPQSSRHICSAGDDTEALVWELPTVAGPNGIDPMCMYSAGCEINQLQWSASQPDWIAIAFANKMQLLKV 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g01041 343 ProSiteProfiles Trp-Asp (WD) repeats profile. 173 213 IPR001680 GO:0005515
Bach12g01041 343 SMART WD40_4 121 163 IPR001680 GO:0005515
Bach12g01041 343 SMART WD40_4 68 113 IPR001680 GO:0005515
Bach12g01041 343 SMART WD40_4 166 204 IPR001680 GO:0005515
Bach12g01041 343 SMART WD40_4 255 295 IPR001680 GO:0005515
Bach12g01041 343 SUPERFAMILY WD40 repeat-like 38 298 IPR036322 GO:0005515
Bach12g01041 343 FunFam WD repeat-containing protein LWD1 11 342 - -
Bach12g01041 343 ProSitePatterns Trp-Asp (WD) repeats signature. 282 296 IPR019775 -
Bach12g01041 343 Pfam WD domain, G-beta repeat 173 204 IPR001680 GO:0005515
Bach12g01041 343 PANTHER WD REPEAT CONTAINING PROTEIN 6 343 IPR045159 -
Bach12g01041 343 Gene3D - 22 342 IPR015943 GO:0005515
Bach12g01041 343 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 262 296 - -
Bach12g01041 343 ProSiteProfiles Trp-Asp (WD) repeats profile. 262 296 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g01041 Bach-Chr12 7324512 7325543 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g01041 K11805 - cpap:110823444 605.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g01041 12 7324512 7325543 Bach12g01041 12 7324512 7325543 ECH