Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00980 ATGGCGTCTCTGGAAATAGCTCGAGTGATTCAGTGTAGACCATCTGTAACTCCGGCGCCAATTGAACGCAATTCTGTAGCGACAAGGCAATTGAATTCCTCTTTTCTGTGCCAAAGGAGGTTTGAAAATGGTACCTTGCGCATTAGACGATCAGTTTCTGGCAGAACTGTAGGTGGGCTTAGTGCTTCACGAGGCGAGCCCTCCGCTGTTGAAGATGAAGAAGAAGAAAAAGACAAAGACAAGCCTCTTCTCTTATCTGGAGAGTTGGATGCTTCTGGCTCTCTGATTGGCTTTCATTTGATTCCCGACTCGGGAAAAATTGTTGAAAAAGATGCAACTACTGATAAAGTGGAAGAATCTGAGGACATAGAAGGAGAAGAGAAAGTTCAGACCAGAACTTTCTATTCAATTGTTTTCGTTACAGCTGAAGCTGCACCATATTCCAAGACTGGAGGCCTAGGAGATGTTTGTGGTTCTTTGCCTATAGCACTTGCAGCTCGTGGACATCGCGTAATGGTTGTCTCTCCTAGATACCAACATGGTACTTCTCAGGATGAGAAGTTTGCTTTTGCAGTTGATCAGTATCGTCCCACCCAAATACATTGCTTTGGAGGGGTGCAAGAAGTTGGCTTTTTCCATGAGTATAGGGAAGGTGTTGATTGGGTTTTTGTGGATCACCCGTCATACCATAGACCTGGAAATCCATATGGGGATAACTATGGTGGTTTTGGTGATAATCAGTTTCGATTCACCTTGCTTTGCCATGCAGCCCTTGAGGCCCCATTGGTACTTCCATTGGGAGGGTTCACTTATGGAGAGAAATGTTTATTTGTCGCTAATGATTGGCATGCAGGCTTAGTTCCAGTACTTCTGGCAGCGAAGTATCGTCCGTATGGTGTATATAAAGATGCACGCAGTATATTAGTGATGCATAACCTAGCACATCAGGGAGTAGAAGCTGCAATTACATATAGTAATTTGGGGTTACCTCCAGAATGGCTTGGAGCACTGGAATGGGTGTTCCCAACTTGGGCAAGGACACATGCCCTTGACACAGGGGAAGCTGTCAATTTTTTAAAAGGTGCAATTGTGACAGCTGATCGGATACTTACAGTAAGCCAGGGATATTCCTGGGAGATAACTACTAGTGAAGGCGGAAATGGTCTGCATGAGCTATTATATGGTCGAAGAAATGTTCTAAATGGAATCACAAATGGAATTGATGTTAATGAATGGGACCCGTCAACAGATAAGCATATTGATGTTCACTATTCTGCTGATGACCTTTCTGGGAAGGTCCAATGCAAGATTTCTTTACAGGTGGAATTGGGTCTTCCTGTTAGGCCTGAATGTCCACTGATTGGATTCATTGGAAGACTAGACTATCAGAAAGGCATCGACTTGATTCGTTTGGCAGCTCCAGAGATTTTGGAAGATGATGTGCAATTTGTAATGCTTGGTTCTGGAAACCCGCAATATGAAGAGTGGATGAGAGCAACAGAGGCAGCTTACAGAGACAAATTTCGGGGTTGGGTTGGGTTTAATGTTCCGGTTTCTCATAGAATAACTGCAGGCTGTGACATACTGTTAATGCCATCCGTGTTTGAGCCATGTGGACTAAATCAGTTGTATGCGATGAGATATGGAACTATACCAGTGGTTCACTCTACTGGGGGATTAAGAGTAAGTCAAACTTATATAAGGCAATTCAATGGAGGTGTTTTCTCTTTGATGTGTTCTTTTGTGGCTGTAAATCTGAGCTCTTTTTTATTCTTACAGGCACTCAGATTTGCGCTTCAAACATACAGAGAGCACAAGTTTTCTTGGGAGGGATTAATGAAGAGATGCATGACAAGGAACTCCACGTGGATAAATGCTGCCATTCAATATGAGCAAGTCTTTCAGTGGGCGTTCCTTGGTCCACCTTACGCCAGCTGA 1938 0.437 MASLEIARVIQCRPSVTPAPIERNSVATRQLNSSFLCQRRFENGTLRIRRSVSGRTVGGLSASRGEPSAVEDEEEEKDKDKPLLLSGELDASGSLIGFHLIPDSGKIVEKDATTDKVEESEDIEGEEKVQTRTFYSIVFVTAEAAPYSKTGGLGDVCGSLPIALAARGHRVMVVSPRYQHGTSQDEKFAFAVDQYRPTQIHCFGGVQEVGFFHEYREGVDWVFVDHPSYHRPGNPYGDNYGGFGDNQFRFTLLCHAALEAPLVLPLGGFTYGEKCLFVANDWHAGLVPVLLAAKYRPYGVYKDARSILVMHNLAHQGVEAAITYSNLGLPPEWLGALEWVFPTWARTHALDTGEAVNFLKGAIVTADRILTVSQGYSWEITTSEGGNGLHELLYGRRNVLNGITNGIDVNEWDPSTDKHIDVHYSADDLSGKVQCKISLQVELGLPVRPECPLIGFIGRLDYQKGIDLIRLAAPEILEDDVQFVMLGSGNPQYEEWMRATEAAYRDKFRGWVGFNVPVSHRITAGCDILLMPSVFEPCGLNQLYAMRYGTIPVVHSTGGLRVSQTYIRQFNGGVFSLMCSFVAVNLSSFLFLQALRFALQTYREHKFSWEGLMKRCMTRNSTWINAAIQYEQVFQWAFLGPPYAS 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00980 645 CDD GT5_Glycogen_synthase_DULL1-like 137 636 - -
Bach12g00980 645 Gene3D Glycogen Phosphorylase B; 409 620 - -
Bach12g00980 645 Hamap Glycogen synthase [glgA]. 135 637 IPR011835 GO:0004373
Bach12g00980 645 MobiDBLite consensus disorder prediction 57 80 - -
Bach12g00980 645 FunFam Starch synthase, chloroplastic/amyloplastic 136 422 - -
Bach12g00980 645 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 134 633 - -
Bach12g00980 645 PANTHER GRANULE-BOUND STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 112 641 - -
Bach12g00980 645 Gene3D Glycogen Phosphorylase B; 155 634 - -
Bach12g00980 645 Pfam Glycosyl transferases group 1 452 561 IPR001296 GO:0016757
Bach12g00980 645 Pfam Starch synthase catalytic domain 137 393 IPR013534 -
Bach12g00980 645 NCBIfam glycogen/starch synthase, ADP-glucose type 136 635 IPR011835 GO:0004373
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00980 Bach-Chr12 6967211 6973148 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00980 106 634 Glycosyltransferase AT3G01180 47.963 2.28e-153 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00980 K00703 - qsa:O6P43_019944 909.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00980 12 6967211 6973148 Bach12g00980 12 6967211 6973148 ECH