Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00943 ATGAAGTTTCATTTGATAAGCGGATTATGGTGGGAAGTAAAAGGCGTTGATGATCTTAAAAGCAACGTCCTCCATTCTCCGTTCATTTCAACCTTTCCCATTTGCTTTTCTTCTTCCTCGCAAATCCAGTCCACCCCAGAGGCTAAGGAGGATCGCTTTGTCGCTGGTATCACGATGGCATCCAAGCGGATCTTGAAGGAACTGAAGGATTTGCAGAAGGATCCTCCTACATCTTGCAGTGCCGGTCCTGTTGCTGAAGACATGTTTCATTGGCAAGCAACGATTATGGGTCCTCCAGACAGTCCTTATGCCGGAGGTGTTTTCCTGGTTACTATTCATTTTCCTCCAGATTACCCTTTTAAGCCACCCAAGGTTGCATTCAGGACAAAGGTTTTCCACCCAAATATAAATAGCAACGGAAGCATTTGCCTTGACATATTGAAGGAGCAGTGGAGCCCTGCTCTAACCATTTCCAAGGTGTTGCTTTCAATTTGCTCTCTGTTGACTGACCCAAATCCCGATGATCCTCTGGTCCCTGAAATTGCCCACATGTACAAGACAGACAGGAACAAGTATGAGTCAACTGCAAGAAGCTGGACCCAGAAATATGCCATGGGTTAA 621 0.4573 MKFHLISGLWWEVKGVDDLKSNVLHSPFISTFPICFSSSSQIQSTPEAKEDRFVAGITMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRNKYESTARSWTQKYAMG 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00943 206 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 132 147 IPR023313 -
Bach12g00943 206 SUPERFAMILY UBC-like 54 205 IPR016135 -
Bach12g00943 206 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 87 193 - -
Bach12g00943 206 Pfam Ubiquitin-conjugating enzyme 63 199 IPR000608 -
Bach12g00943 206 CDD UBCc 61 200 IPR000608 -
Bach12g00943 206 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 59 205 IPR000608 -
Bach12g00943 206 SMART ubc_7 62 205 - -
Bach12g00943 206 FunFam Ubiquitin-conjugating enzyme 28, E2 59 206 - -
Bach12g00943 206 Gene3D Ubiquitin Conjugating Enzyme 54 206 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00943 Bach-Chr12 6672979 6675507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00943 60 172 Miscellaneous Gene Families AT3G17000 36.975 1.37e-19 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00943 K06689 - gmx:100499824 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00943 12 6672979 6675507 Bach12g00943 12 6672979 6675507 ECH