Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00919 ATGGCACTTCTGGAGAATTGCTTACGGGTTACCACAGTAGGCAGAGTCACACCCCAATGTCCTCATTCATTTTCTTCAAATTCAAAGGAAAAGCTTCATTTCCCAACATATAGAGGATTTAAGAAATCTAGGTTAACATCCATAGAATCAACCCCAAATTCTGTTCATTCAATCCATGGTAACTACAGAAAATCCCTTATTATCTGCAAAGCTGGTAAAGCGGTGACTGAAGTTCGAGAGGTAACAGACTCAAGCTGGAACAGCCTTGTGATCGCAAGTGAAAGCCCTGTGCTGGTAGATTTTTGGGCACCATGGTGTGGTCCATGCAGGATGATTGCTCCTATTATTGATGAATTAGCAAAGGAATATGCTGGAAAAATTGTATGCTTCAAGGTCAACACTGATGACTGCCCAAACATAGCCACACAATATGGAATCAGAAGCATACCTACTGTTCTGTTCTTCAAGAATGGAGAGAAAAAGGAAAGTATAATCGGTGCAGTTCCCAAGTCCACCTTGACTGCAACAGTAGAAAAATATGTTGATGTCTAAATCGGTTGAGGAATAACAAGATAAGGGTATGCTTTAA 589 0.4058 MALLENCLRVTTVGRVTPQCPHSFSSNSKEKLHFPTYRGFKKSRLTSIESTPNSVHSIHGNYRKSLIICKAGKAVTEVREVTDSSWNSLVIASESPVLVDFWAPWCGPCRMIAPIIDELAKEYAGKIVCFKVNTDDCPNIATQYGIRSIPTVLFFKNGEKKESIIGAVPKSTLTATVEKYVDV 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00919 183 NCBIfam thioredoxin 82 180 IPR005746 GO:0015035
Bach12g00919 183 ProSitePatterns Thioredoxin family active site. 98 116 IPR017937 -
Bach12g00919 183 FunFam Thioredoxin 67 181 - -
Bach12g00919 183 PANTHER GEO12009P1 80 181 - -
Bach12g00919 183 ProSiteProfiles Thioredoxin domain profile. 69 182 IPR013766 -
Bach12g00919 183 PRINTS Thioredoxin family signature 97 105 - -
Bach12g00919 183 PRINTS Thioredoxin family signature 105 114 - -
Bach12g00919 183 PRINTS Thioredoxin family signature 145 156 - -
Bach12g00919 183 SUPERFAMILY Thioredoxin-like 68 182 IPR036249 -
Bach12g00919 183 CDD TRX_family 90 178 - -
Bach12g00919 183 Gene3D Glutaredoxin 77 182 - -
Bach12g00919 183 Pfam Thioredoxin 78 178 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00919 Bach-Chr12 6520517 6521377 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00919 K03671 - gmx:100500292 272.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00919 12 6520517 6521377 Bach12g00919 12 6520517 6521377 ECH