LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach12g00911	ATGATAAGTGACGAGAACTTGAGGTCTGGGGACTTGAACTTGTTCTTTGAAAAGCTTATCATGGTTGCTGGCGGTGGTAGCGGTGGCAATAACAATAAAGGAGTGAAAATGGCTATCACCGAATGGAAGGACATCCCGGTGGAGCTTTTGATGCAAATTCTGTCGCTTGTGGATGATCAGACGGTGATCTCTGCTTCTGGAGTCTGTCGTGGGTGGAGAGATGCTATTTGCTTTGGCCTTACCCGTTTATCACTCTCATGGTGTAGTAAGAATATGAATGAGTTGGTCCTAGCACTTACTCCTAAATTCACAAAGTTGCAAACTCTAATACTTCGTCAAGACAAACCTCAACTACAGGATATTGCTGTTGAGACTATTGCAAATTACTGTCTCGACCTGCAGATCCTGGATCTCAGCAAAAGCTTCAAGCTCACTGACCAGTCACTATACGCCTTGGCCCATGGTTGTCCTGATCTTACAAAACTGAACATCAGTGGCTGTTCAGCATTTAGTGATCATGCCCTGGCTTACTTAGCCAGTTTCTGTAGAAAATTGAAAGTTTTCAATCTTTGTGGATGTGTTAAAGCAGCATCTGATACTGCGTTGCAGGCTATTGGACGTTACTGCAATCAGTTGCAGTCTCTGAGCCTTGGATGGTGTGAAAATGTGAGTGATGTTGGAGTGATGAGTTTAGCAGCTGGCTGCCCTGATCTTAGAACACTTGATTTGTGTGGCTGTGTCCGCATAACAGATGATAGTGTAATTGCTTTGGCAAACAGATGTGCTCATCTGAGGTCTCTTGGACTGTACTACTGCCAAAACATCACGGACAGGGCAATGTATTCTTTGGCACACAGCAAAGTGAATCACCGGATGTGGGGATCTGTGAAAAGTGGAAACGATGAAGATGGGCTAAGAACTCTCAACATCAGCCAATGCACAGCACTCACCCCTTCTGCTGTTCAGGCAGTCTGTGATTCATTCCCAGCACTTCACACCTGCTCGGGAAGGCACTCACTTATCATTAGTGGCTGTTTGAATTTGACGTCTGTGCATTGTGCTTGTGCCGTCCATGCTGACCGTCCCTTTAGCACGCTTCCGCATCCAGCTCATTGA	1116	0.4579	MISDENLRSGDLNLFFEKLIMVAGGGSGGNNNKGVKMAITEWKDIPVELLMQILSLVDDQTVISASGVCRGWRDAICFGLTRLSLSWCSKNMNELVLALTPKFTKLQTLILRQDKPQLQDIAVETIANYCLDLQILDLSKSFKLTDQSLYALAHGCPDLTKLNISGCSAFSDHALAYLASFCRKLKVFNLCGCVKAASDTALQAIGRYCNQLQSLSLGWCENVSDVGVMSLAAGCPDLRTLDLCGCVRITDDSVIALANRCAHLRSLGLYYCQNITDRAMYSLAHSKVNHRMWGSVKSGNDEDGLRTLNISQCTALTPSAVQAVCDSFPALHTCSGRHSLIISGCLNLTSVHCACAVHADRPFSTLPHPAH	371

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach12g00911	371	Gene3D	Ribonuclease Inhibitor	50	303	IPR032675	-
	Bach12g00911	371	FunFam	F-box protein SKP2B	77	295	-	-
	Bach12g00911	371	CDD	F-box_AtSKP2-like	41	88	-	-
	Bach12g00911	371	Pfam	F-box-like	43	76	IPR001810	GO:0005515
	Bach12g00911	371	SUPERFAMILY	F-box domain	41	80	IPR036047	GO:0005515
	Bach12g00911	371	PANTHER	UNCHARACTERIZED	234	350	-	-
	Bach12g00911	371	SMART	LRR_CC_2	209	234	IPR006553	-
	Bach12g00911	371	SMART	LRR_CC_2	156	181	IPR006553	-
	Bach12g00911	371	SMART	LRR_CC_2	103	129	IPR006553	-
	Bach12g00911	371	SMART	LRR_CC_2	302	327	IPR006553	-
	Bach12g00911	371	SMART	LRR_CC_2	77	102	IPR006553	-
	Bach12g00911	371	SMART	LRR_CC_2	235	260	IPR006553	-
	Bach12g00911	371	SMART	LRR_CC_2	130	155	IPR006553	-
	Bach12g00911	371	SMART	LRR_CC_2	182	208	IPR006553	-
	Bach12g00911	371	SMART	LRR_CC_2	261	286	IPR006553	-
	Bach12g00911	371	SUPERFAMILY	RNI-like	76	352	-	-
	Bach12g00911	371	Pfam	Leucine Rich repeat	261	284	IPR001611	GO:0005515
	Bach12g00911	371	Pfam	Leucine Rich repeat	235	258	IPR001611	GO:0005515
	Bach12g00911	371	Pfam	Leucine Rich repeat	209	232	IPR001611	GO:0005515

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach12g00911	Bach-Chr12	6474578	6476746	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach12g00911	K03875		-	gmx:100818928	627.091

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bach12g00911	12	6474578	6476746	Bach12g00911	12	6474578	6476746	ECH