LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach12g00902	ATGGCTCTGGGAAAGTATTCTCGAGTTGAAGGGAGGAAGTCATCTAACTATTGTTCTAACGTTTCTGTACTTGTGTTCGTTGCATTTTGTTTAGTTGGTTTGTGGATTGTAATGTCATACATTGCTCCAATTCAGAGTTCAGACTTGCAGGCAACTGAGACCATTAATGAGGTGAAAAATATAGTAAGCACAAACGGTTTGAGGCAATTTGAAGAAACTTCAGGTGATATATTGGATGGCTCATTTAAGGGAGATGGCAAGACTAAATCCAAGAGTGAAAGCCTTCCAGAAAACCAGGATGATGGAAAAACAATTAAGAAAGAGCCTAATAATATAGCTGAAGAAAACAAGAAAGAAGTTGTTGTAAGGGCAAGCTCTGATGAGAAGAATGATTCAAAAAAGGGTTCTGGGAATACAATTGACGACAATTATGAAGAGAGGCTTGTGAAGCCTAGCTCCAAGGAGAAAGGTTCAGACATAAATTCAGAATTGGTAGAAACAGAAACACTCGGTGGTCAAACTAATGATAGCGATCTCAGAGAATCAGGGGAAACTTTAGATGAAAAGAAATCCAACATAAACTTTGGTGACAACTTAGAGACCGAAAAGAATACAGGTGAAGCAAAACAGCAAGATGAGCTAGCTAATCAGACTGAGGAGGGGAAAATCAAGAAAAATCTGGATCCTAATACAGAAAATACTACTGGAGAGTTTAACATGGAAATCCATGATAACAGTCAAGCTTCAAAAGAAGATTTTTCTGCTAGTACCCTGTCAGAAACTCCAAATGATGCTAGCAGTGGAAATGGAACTTGGTCAACTCAAGTTGTAGAGTCAAGATTTGAGAAGGAATCACAAAAGTCTTCAATTTCTAATGAAAGAAGTAAATATGATTGGAAACTTTGTAATACAACTGCAGGACCAGAGTACATTCCTTGTCTTGACAATTGGCTAGCAATTAGAAGGCTTCGAAGTATAAAGCACTATCAACATAGAGAGAGGCATTGTCCTGATGAACCTCCCTTCTGTCTTGTTCCTCTACCTGAGGGCTACAGAATCCCAATTAAGTGGCCCAAAAGCAGGGAAAAGATATGGTTCAATAACGCTCCCCACACAATGCTGGCTGAAGTTAAGGGGCATCAGAACTGGGTCAAAGTTGCTGGTGAATATTTGACTTTTCCTGGAGGTGGAACTCAGTTTAAGAATGGTGCTCTTCATTACATTGACTTCATCCAGAAATCCCTTCCAAACATTGCATGGGGGAGAAGAAGTCGTGTGATATTGGATGTTGGATGTGGGGTAGCCAGCTTCGGAGGTTTCTTGTTTGAAAAGGATGTCCTGGCAATGTCATTTGCTCCCAAAGATATCCATGAGGCCCAAGTACAATTTGCGCTTGAGCGAGGAATTCCTGCCATAGTAAATGTCATGGGCAGCAAAAGATTGCCCTTCCCTGGTTGTGTCTTTGATCTAGTCCACTGTGCACGCTGCAGAGTCCCTTGGCACATGGAAGGTGGTAGGCTACTCTTGGAGCTTAATCGTGTCTTGAGACCTGGAGGTTACTTTGTCTGGTCTGCTACTCCAGTGTATCGAAATCTTCCAGAAGATGTTGAAATTTGGAAAGCTATGTCTGAACTAACAAAGTCAATGTGCTGGGATCTAGTGGTGATTGGAAAAGATAAATTGAATGGAGTAGCAGCAGCAATATATAGAAAACCAATTTCCAATGAATGCTACAACAGAAGACCCAAAAATGAGCCTCCCATGTGCAATGAGTCTGACAATGCAAATGCAGCCTGGAATACATCCCTACAGGCTTGTATGCACAAGGTGGCTGCAGGTGCATCAGAGCGTGGGTCGCTTTGGCCTGAGGAATGGCCACAGAGGTTGGAGAAACCACCTTACTGGTTAAACTCTCAGGTTGGTGTTTATGGAAGAGCTGCTCCAGAGGATTTTACTGCTGACTACAAGCATTGGAGAAATGTCCTTTACCACTTGTATCTGAATGGAATGGGTATCAACTGGTCTTCAGTAAGAAATGTCATGGACATGAAAGCTGTTTATGGAGGGTTTGCAGCAGCACTCAGAAGTATGAGGGTATGGGTTATGAATGTTGTTTCAATTGACTCTCCAGACACACTGCCAATAATCTATGAGCGTGGTTTATTTGGAATTTATCACGATTGGTGTGAATCATTCAATACTTACCCCAGATCTTATGATCTTCTCCATGCTGATTATCTGTTCTCAAAGCTTAAGGAAAGGTGCAATATAGTAGCAGTGATAGCAGAAGTTGATAGGATCCTTAGACCAGAAGGTAATCTGATCATCAGGGACAACGTTGAAACGATTGGTGAGATAGAGAGCATAGCTAAATCTCTACAATGGAATATTCAGTTCACATTTTCAAAAGGGAGCGAGGGATTGCTTTGTGTTCGGAAGACATTCTGGCGTCCAACAAAGATAGAAACCATTATGTCAGCCATTGTCTGATGAATGAGTGTAATGCTTCAATGTCTGAATTTCAAAGGCTGTTATATTCTTCATTATAGCGAAATAGGTATCTTTTGCTTATTTGACCATATTTATTGAAGAATGTCAGCTTTACCTCTA	2610	0.4096	MALGKYSRVEGRKSSNYCSNVSVLVFVAFCLVGLWIVMSYIAPIQSSDLQATETINEVKNIVSTNGLRQFEETSGDILDGSFKGDGKTKSKSESLPENQDDGKTIKKEPNNIAEENKKEVVVRASSDEKNDSKKGSGNTIDDNYEERLVKPSSKEKGSDINSELVETETLGGQTNDSDLRESGETLDEKKSNINFGDNLETEKNTGEAKQQDELANQTEEGKIKKNLDPNTENTTGEFNMEIHDNSQASKEDFSASTLSETPNDASSGNGTWSTQVVESRFEKESQKSSISNERSKYDWKLCNTTAGPEYIPCLDNWLAIRRLRSIKHYQHRERHCPDEPPFCLVPLPEGYRIPIKWPKSREKIWFNNAPHTMLAEVKGHQNWVKVAGEYLTFPGGGTQFKNGALHYIDFIQKSLPNIAWGRRSRVILDVGCGVASFGGFLFEKDVLAMSFAPKDIHEAQVQFALERGIPAIVNVMGSKRLPFPGCVFDLVHCARCRVPWHMEGGRLLLELNRVLRPGGYFVWSATPVYRNLPEDVEIWKAMSELTKSMCWDLVVIGKDKLNGVAAAIYRKPISNECYNRRPKNEPPMCNESDNANAAWNTSLQACMHKVAAGASERGSLWPEEWPQRLEKPPYWLNSQVGVYGRAAPEDFTADYKHWRNVLYHLYLNGMGINWSSVRNVMDMKAVYGGFAAALRSMRVWVMNVVSIDSPDTLPIIYERGLFGIYHDWCESFNTYPRSYDLLHADYLFSKLKERCNIVAVIAEVDRILRPEGNLIIRDNVETIGEIESIAKSLQWNIQFTFSKGSEGLLCVRKTFWRPTKIETIMSAIV	829

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach12g00902	829	FunFam	probable methyltransferase PMT23	399	583	-	-
	Bach12g00902	829	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	332	586	IPR029063	-
	Bach12g00902	829	Gene3D	Vaccinia Virus protein VP39	398	570	IPR029063	-
	Bach12g00902	829	PANTHER	SAM-DEPENDENT METHYLTRANSFERASE	21	817	IPR004159	GO:0008168
	Bach12g00902	829	MobiDBLite	consensus disorder prediction	228	279	-	-
	Bach12g00902	829	MobiDBLite	consensus disorder prediction	180	227	-	-
	Bach12g00902	829	MobiDBLite	consensus disorder prediction	76	289	-	-
	Bach12g00902	829	CDD	AdoMet_MTases	427	522	-	-
	Bach12g00902	829	MobiDBLite	consensus disorder prediction	82	162	-	-
	Bach12g00902	829	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	649	794	IPR029063	-
	Bach12g00902	829	MobiDBLite	consensus disorder prediction	163	179	-	-
	Bach12g00902	829	Pfam	Putative S-adenosyl-L-methionine-dependent methyltransferase	309	806	IPR004159	GO:0008168

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach12g00902	Bach-Chr12	6408748	6412841	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach12g00902	-		-	gmx:100793395	1217.6