Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00894 ATGCGAGAGGCACAAAGAGCTCGTGGCCCAGCCACAATCCTTGCCATTGGTACTGCAACTCCCTCAAACTGTATTTACCAATCTGACTTCGCCGATTATTACTTCCGCGTCACCAACAGCAATCACATGCCTCACCTCAAAGCCAAGTTAAAGCGCATATGTGAGAAGTCGATGATAAAGAAACGTTACATACACTTGACTGAAGAAATGCTGAAGCGAAATCCCAACATAAGCACTTATGAGAAACCATCTCTAAATGTACGTCAGGATATACTGGTAGTGGAGGTGCCAAAGCTCGGTGAGAAAGCTGCATCAAAAACCATCAACGAATGGGGCGGTCGCAAATCAGATATCACCCATCTCGTTTTCTGCTCCACTTCTGGTGTAGACATGCCTGGTGCCGACTATCAACTCGTCAAGCTCTTAGGCCTCAACCCCTCCGTCAAACGCTTCATGTTGTATCATCAAGGCTGCTTTGCCGGCGGTACCGTGCTCCGTCTCGCCAAAGATCTCGCCGAGAATAATGCCGGTGCACGTGTTCTCGTTGTTTGCTCTGAGATCACCGTTGTTACATTCCGTGGGCCCTGCGAGACACACTTGGACTCCTTAGTGGGCCAAGCCCTCTTCGGCGATGGTGCTTCAGCGGTGATCGTTGGTTCCAATCCTAGAACAACAAATCCAACTGAGCGACCACTGTTCCATCTGATGTCTGCGTCGGAGACAATCCTACCCAACTCAGAAGGTGCAATCGAGGGACACTTACGTGAAGTGGGACTCACTTTTCATCTGAAGGATAACGTGCCCCAATTAATTTCAGACAACATAGAGAGAAGTCTCGAAGAAGCCTTCAACCCAATTGGGATCAGTGACTGGAACTCATTGTTTTGGATAGCTCATCCTGGTGGCCCAGCAATCCTGAACCAGATTGAAGCAACGCTTGGGCTGAAGGAGGAGAAACTGAGAGCAACTAAGCACGTGCTGAGCGAGTATGGGAACATGTCCAGTGCATGTGTGTTGTTTATTTTGGATGAGATGAGAAGGAGGTCTATGGAGGAAGGAAAAGCCACCACAGGAGATGGGCTTACGTGGGGTGTGCTATTTGGGTTTGGGCCAGGCTTGACCATGGAAAGCATTGTTCTGCATAGCGCACCCATACAGTACAGCTAG 1167 0.4927 MREAQRARGPATILAIGTATPSNCIYQSDFADYYFRVTNSNHMPHLKAKLKRICEKSMIKKRYIHLTEEMLKRNPNISTYEKPSLNVRQDILVVEVPKLGEKAASKTINEWGGRKSDITHLVFCSTSGVDMPGADYQLVKLLGLNPSVKRFMLYHQGCFAGGTVLRLAKDLAENNAGARVLVVCSEITVVTFRGPCETHLDSLVGQALFGDGASAVIVGSNPRTTNPTERPLFHLMSASETILPNSEGAIEGHLREVGLTFHLKDNVPQLISDNIERSLEEAFNPIGISDWNSLFWIAHPGGPAILNQIEATLGLKEEKLRATKHVLSEYGNMSSACVLFILDEMRRRSMEEGKATTGDGLTWGVLFGFGPGLTMESIVLHSAPIQYS 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00894 388 Pfam Chalcone and stilbene synthases, C-terminal domain 235 383 IPR012328 -
Bach12g00894 388 Gene3D - 1 231 IPR016039 GO:0016746
Bach12g00894 388 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 2 383 IPR011141 GO:0009058|GO:0016747
Bach12g00894 388 CDD CHS_like 10 380 - -
Bach12g00894 388 FunFam Chalcone synthase 2 1 231 - -
Bach12g00894 388 PIRSF PKS_III 1 384 IPR011141 GO:0009058|GO:0016747
Bach12g00894 388 SUPERFAMILY Thiolase-like 231 382 IPR016039 GO:0016746
Bach12g00894 388 ProSitePatterns Chalcone and stilbene synthases active site. 150 166 IPR018088 GO:0009058|GO:0016746
Bach12g00894 388 Pfam Chalcone and stilbene synthases, N-terminal domain 2 222 IPR001099 -
Bach12g00894 388 FunFam Chalcone synthase 1 232 384 - -
Bach12g00894 388 Gene3D - 232 387 IPR016039 GO:0016746
Bach12g00894 388 SUPERFAMILY Thiolase-like 2 223 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00894 Bach-Chr12 6319169 6320660 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00894 122 379 Acyl Lipid Metabolism Gene Families AT1G71160 24.742 1.55e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00894 K00660 - nnu:104591893 620.157