Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00874 ATGGAGTTGCCAGAGTGTCCTGTTTGCCTTCAGAATTACAACGACGAGAGTACAGTTCCTCGGGTACTCTCCTGCGGCCACTCGGTTTGCGAGGCTTGCCTTGTTGAACTGCCACAACGATACTCCGATACTATTCGCTGCCCCGCTTGTACCCAACTCGTCAAGTACCCAGCCCAACAAGGCCCCTCTGGTCTTCCCAAGAACATTGACCTCCTCAGACTCTGTGTAGAACAATCTTCTTCTTCTTCAAAATCTCTGAAATCCAACCAACAATCCACAAATAATGGGTGTGATCACTCTCAATTTTGTCCCCGGTTCTGGTCGGAGGAGTTCTACACCACCTGGAAGGACTGGATTCTTCCACACGACCTCGTTTCGATTGATTCGGAATCCAGTGATCACGAAAGGTCTGGTCTTGCGTTTGTGCTACGAGGACGATTTGGCTCAACTTCTTCATTGAAAGGTCGGGTTTGCTTCAAAGATAACCACGATTTGAGCCTTGCTCCCATCGTTTCTTTACCACCTGTGAGTGATTCTAAATTCAGGTTTTGTTACGTTGCCCGAATTATGAAGTGTCTGCAGGGGATGAAAGAGGTTGAGAGGGAAGAATTGGCTCTGGTACTCAAAGTTTCTTCGAAACAGAATCGGATATGTAAAGTTTACGGCTTGTGGAGTGACTTAGTTGATGGGTATCTTTATCTAGTGTGCGAGAGGCACGATGATAGTCTTCCCAACAAGTTCGGTGAATTGAGAAATGGGTTTCTCGGTGCGGGTGGGGATGGTTTGAGCAGAGATGGAGTTTTGAGTTTTGCTATGGTAGGTATGAGTATTTGTGAAGCTTTGATCGCTTTTCATTCGGGAGGTTTGGCTGCAGGCTATTTTGGACTTTCTTGCTTCTGTTTTGATGAGCTTGGCAGTATTTGTATTGATCTGAATGAGGTGTTATTGACTGGAAGACAAATTCCTCGTACTGTCATGAATATCATTTCTGGGTGCAGTAGTAATGAAGATAAAAAAGGAGTAATTCGCAATGATTTCTTGAAGAATGAGGTTTTCATAAACCCAGAGCTTTTGTTTGAGTTATTGCCGAAAGAGTTTATCACTATAGAGGATGGTTATACTAGGTATCCCATTGGATATAGTTCAGATGTCTGGTCATTGGCTTGTGTGTTGCTGCAGCTTCTTTTTGGATATTCACTTCCCCGGTATACCTTGATAATGAATGAAGAGAAAGGCTTTAACTTCTCAGCTAGTTATATTAGTTGGGTGGAGCAAGTTAATTCTTTTCTGGAAGATAAATTGGGTTCAGAATATCTAATATTGAGGCAGACTCTTTGCAATTGTTTGGCCTTAAATCCAGGAAGTCGCATGCATGTGTCTGATGTAAGGAAATGCATTCAAGATATGATAGTAAAAACTCAATTTGATGTTTTGGGGAGCTTGGAGGTTGCAACAAATAGGAACAGTGTAGATCGCTGCTTAATTCTGGGGGAATTGTGTCAATTTCACAAGGAAAGGTCAAAAGCACAGAGAAAATGTGACTTGCAGGAGAAGCAAGAAGGTGGTCAACCAGATTTTTCTCAAGATGGAGAGGACAAAGCTGATGAGGGTTTATCTAAGGGAATGGTTGAACTTACAGATCTGCGAGGCCATCTCAATTGTATAACGGGATTAGCTATTGGAGGGGGATTTCTGTTTAGCTCCTCATTCGACAAAACCATTCATGTATGGTCTTTGCAGGATTTTTCCCATCTACACACGTTTACAGGTCATGAGCATAGAGTCATGGCTCTGGCTTATGTAGACGAAGAAGACCCATTGTGCATAAGTGGGGACACTGGCGGGGGCATATTTATCTGGGGAATAACTGCTCCTCTTAGGGAAGATCCATTGAGGAAATGGTATGAGCAAAGGGATTGGCGCTTTAGTGGTATCCATTCCTTGACTGTTTCCAGAGAGCATGGTCTTTACACTGGAAGTGGAGATAGATCAATAAAAGCTTGGTCATTGAAGGATGGCAATTTGATATGCACGATGACTGGTCATAAATCTGTAGTTTCAACACTCGCAATATATGATGAGGTTCTTTACAGTGGTAGTTGGGATGGAACCATTCGGTTGTGGAGTCTTAATGATCACAGTCCATTGACAGTTCTGGGGGAAGATATGTCTGGTGACATTAAGCCTGTCTTATCTATTATTGCTGATGGGCATTTGCTTGTTGCGGCTCAAGAAAATGGATGTATAAAGGTCTGGGAGAATGATGTATTCATGAATGAAAAAAAATTGCACAGTGGTGCCATTTTTGCTATTAGTATGCGGGGAAAATTCCTTTATACAGGAGGCTGGGACAAAAATGTTAATATACAGGAATTATCAGGAGATGAGTTTCAACTGGATGTCAGATCAATTGGATCTATATCTTGCCGTTCTGTTGTAACAGCTATATTATGCTGGGAAGGAAGACTTTATGTTGGATATGCTGACAACTCTATTAAGGTTTACAATCACGAGTAACGTTAGAATTTCACCAGATGATGCAAGCAACACTTGAAGGGTGTTCTGTACATATTTTATAGCTCAGTTAGGAACTACACTTTGAGGCGTAATGTTTTTCTGATGAAATATTGCTGCCCAACAGCGTTCTCTGATCCTTCATTTTTTTTGTTTTTTCTTCCTTGGCACGAACTTCTCTGATCCATTTTGTATAAAAATAGTAACGGTTATGGTTTAATGCACTTGCTGCCTTTCCTTATGGTTACAA 2764 0.4186 MELPECPVCLQNYNDESTVPRVLSCGHSVCEACLVELPQRYSDTIRCPACTQLVKYPAQQGPSGLPKNIDLLRLCVEQSSSSSKSLKSNQQSTNNGCDHSQFCPRFWSEEFYTTWKDWILPHDLVSIDSESSDHERSGLAFVLRGRFGSTSSLKGRVCFKDNHDLSLAPIVSLPPVSDSKFRFCYVARIMKCLQGMKEVEREELALVLKVSSKQNRICKVYGLWSDLVDGYLYLVCERHDDSLPNKFGELRNGFLGAGGDGLSRDGVLSFAMVGMSICEALIAFHSGGLAAGYFGLSCFCFDELGSICIDLNEVLLTGRQIPRTVMNIISGCSSNEDKKGVIRNDFLKNEVFINPELLFELLPKEFITIEDGYTRYPIGYSSDVWSLACVLLQLLFGYSLPRYTLIMNEEKGFNFSASYISWVEQVNSFLEDKLGSEYLILRQTLCNCLALNPGSRMHVSDVRKCIQDMIVKTQFDVLGSLEVATNRNSVDRCLILGELCQFHKERSKAQRKCDLQEKQEGGQPDFSQDGEDKADEGLSKGMVELTDLRGHLNCITGLAIGGGFLFSSSFDKTIHVWSLQDFSHLHTFTGHEHRVMALAYVDEEDPLCISGDTGGGIFIWGITAPLREDPLRKWYEQRDWRFSGIHSLTVSREHGLYTGSGDRSIKAWSLKDGNLICTMTGHKSVVSTLAIYDEVLYSGSWDGTIRLWSLNDHSPLTVLGEDMSGDIKPVLSIIADGHLLVAAQENGCIKVWENDVFMNEKKLHSGAIFAISMRGKFLYTGGWDKNVNIQELSGDEFQLDVRSIGSISCRSVVTAILCWEGRLYVGYADNSIKVYNHE 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00874 838 CDD RING-HC_TRIM32_C-VII 4 53 - -
Bach12g00874 838 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 679 711 - -
Bach12g00874 838 ProSiteProfiles Protein kinase domain profile. 136 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g00874 838 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Bach12g00874 838 Pfam RING-type zinc-finger 6 48 IPR027370 -
Bach12g00874 838 SUPERFAMILY RING/U-box 5 57 - -
Bach12g00874 838 SMART ring_2 6 50 IPR001841 -
Bach12g00874 838 SMART WD40_4 541 578 IPR001680 GO:0005515
Bach12g00874 838 SMART WD40_4 712 753 IPR001680 GO:0005515
Bach12g00874 838 SMART WD40_4 754 791 IPR001680 GO:0005515
Bach12g00874 838 SMART WD40_4 581 621 IPR001680 GO:0005515
Bach12g00874 838 SMART WD40_4 800 836 IPR001680 GO:0005515
Bach12g00874 838 SMART WD40_4 627 669 IPR001680 GO:0005515
Bach12g00874 838 SMART WD40_4 672 709 IPR001680 GO:0005515
Bach12g00874 838 MobiDBLite consensus disorder prediction 513 533 - -
Bach12g00874 838 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 88 IPR013083 -
Bach12g00874 838 Pfam WD domain, G-beta repeat 674 709 IPR001680 GO:0005515
Bach12g00874 838 Pfam WD domain, G-beta repeat 545 578 IPR001680 GO:0005515
Bach12g00874 838 PRINTS G protein beta WD-40 repeat signature 565 579 IPR020472 -
Bach12g00874 838 PRINTS G protein beta WD-40 repeat signature 696 710 IPR020472 -
Bach12g00874 838 PRINTS G protein beta WD-40 repeat signature 656 670 IPR020472 -
Bach12g00874 838 ProSiteProfiles Zinc finger RING-type profile. 6 51 IPR001841 -
Bach12g00874 838 Gene3D - 628 838 IPR015943 GO:0005515
Bach12g00874 838 PANTHER - 1 836 IPR044715 -
Bach12g00874 838 Gene3D Transferase(Phosphotransferase) domain 1 294 484 - -
Bach12g00874 838 SUPERFAMILY WD40 repeat-like 545 836 IPR036322 GO:0005515
Bach12g00874 838 ProSiteProfiles Trp-Asp (WD) repeats profile. 548 587 IPR001680 GO:0005515
Bach12g00874 838 Gene3D - 513 627 IPR015943 GO:0005515
Bach12g00874 838 SMART serkin_6 141 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach12g00874 838 ProSiteProfiles Trp-Asp (WD) repeats profile. 679 718 IPR001680 GO:0005515
Bach12g00874 838 SUPERFAMILY Protein kinase-like (PK-like) 190 473 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00874 Bach-Chr12 6153940 6158588 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00874 563 781 Acyl Lipid Metabolism Gene Families AT3G18860 30.263 8.67e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00874 - K03070 qsa:O6P43_019786 1124.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00874 12 6153940 6158588 Bach12g00874 12 6153940 6158588 ECH