Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00854 ATGGTGGAAAGGGTTTCGTTTTGCTTGCTCTTTGTCTTTGTTTTATCTCTCTTCGTATCGTTGCCCATACAGATCTCTGCAGATGAATCTGCAGAAGGCAAAGAATTCGTGCTCACTTTGGACCATTCTAACTTCACTGACACTATCAGCAAACATGATTTCATCGTCGTCGAGTTCTACGCACCTTGGTGTGGCCACTGTCAGAAGCTAGCTCCAGAGTATGAGAAAGCTGCTTCTATCTTGAGTAGTCATGACCCTCCGATTGTTTTGGCTAAACTTGATGCCAACGAGGAAAAGAACAGAGAACTTGCAACTGAATATGAAGTTAGGGGATTCCCAACAATTAAGATTCTGAGAGATGGAGGAAAGAATATTGAAGAATACAAAGGTCCTCGTGAGGCAGATGGTATTGTTGATTATCTTAAGAAACAAAGTGGTCCCGCATCAACCGTAATTAAGTCTGCTGATGACGCTAGTGTTTTTATTGGTGAAAATAAAGTTGTTATTGTTGGGGTTTTTCCACAATTTTCTGGGGAAGAGTTTGAGAACTTCACTGCTTTAGCGGAGAAATTGCGGTCTGACTATGACTTTGGTCACACCTTGGATGCAAAACACCTTCCACGGGGAGAATCTTCCGTGTCTGGACCCCTAGTCCGATTGTTCAAGCCATTTGACGAACTATTTGTCGATTTCCAGGATTTCCATGTGGAAGCTCTAGGGAAATTTATTGAAGAAACTAGTGTCCCACTTGTGACGATCTTTAACAATGACCCAGCCAATCACCCTTATGTTATCAAATTCTTTAACAGTCCCAATGCAAAGGCAATGTTGTTTATCAACTTCACTGCTGAAAATGCTGATTCTTTCAAGTCAAAGTACCGTGAAGCTGTTGAGCAATATAGACAAGATGGCATAAGCTTTTTGGTAGGAGATCTTGAGGCTAGTCAACGTGCCTTCGAGTATTTTGGACTTAAGGAAGACCAAGTGCCTCTGATTATCATACAACATAATGATGGAAAGAAATTTCTTAAACCAAATTTGGAAGCTGATCACATTCCAACTTGGTTGAAGGCATACAAGGCTGGAGAAGTTCAACAATATAAGAAATCTGAACCTATTCCTGAAGTTAACAATGAGCCTGTCAAAATTGTAGTTGCAGACACCCTTCAAGACATTGTTTTCAACTCAGGGAAAAATGTTTTGCTGGAGTTCTATGCTCCTTGGTGTGGTCATTGCAAGAAGTTAGCTCCTATATTGGATGAAGTTGCTGTCTCTTACCAAAACGATGCTGACATTGTCATTGCAAAACTGGATGCTACTGCCAATGATATCCCACGTGATGCCTTTGACGTCCAAGGTTATCCAACACTCTACTTCCGCAAGAACAAGCAACTCCTCAGCAAGAAGCCGCAAAAGATGAGCTTTGAAAAGGCAAACAACTCCTACGAGGATATAGAGACACACAGTTACGTGTAG 1476 0.4146 MVERVSFCLLFVFVLSLFVSLPIQISADESAEGKEFVLTLDHSNFTDTISKHDFIVVEFYAPWCGHCQKLAPEYEKAASILSSHDPPIVLAKLDANEEKNRELATEYEVRGFPTIKILRDGGKNIEEYKGPREADGIVDYLKKQSGPASTVIKSADDASVFIGENKVVIVGVFPQFSGEEFENFTALAEKLRSDYDFGHTLDAKHLPRGESSVSGPLVRLFKPFDELFVDFQDFHVEALGKFIEETSVPLVTIFNNDPANHPYVIKFFNSPNAKAMLFINFTAENADSFKSKYREAVEQYRQDGISFLVGDLEASQRAFEYFGLKEDQVPLIIIQHNDGKKFLKPNLEADHIPTWLKAYKAGEVQQYKKSEPIPEVNNEPVKIVVADTLQDIVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADIVIAKLDATANDIPRDAFDVQGYPTLYFRKNKQLLSKKPQKMSFEKANNSYEDIETHSYV 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00854 491 FunFam Protein disulfide-isomerase 145 245 - -
Bach12g00854 491 Pfam Thioredoxin 382 468 IPR013766 -
Bach12g00854 491 Pfam Thioredoxin 37 143 IPR013766 -
Bach12g00854 491 SUPERFAMILY Thioredoxin-like 348 473 IPR036249 -
Bach12g00854 491 NCBIfam protein disulfide-isomerase 37 463 IPR005792 GO:0003756
Bach12g00854 491 Gene3D Glutaredoxin 241 375 - -
Bach12g00854 491 ProSiteProfiles Thioredoxin domain profile. 367 491 IPR013766 -
Bach12g00854 491 FunFam Protein disulfide-isomerase 25 144 - -
Bach12g00854 491 CDD PDI_a_PDI_a'_C 380 461 - -
Bach12g00854 491 SUPERFAMILY Thioredoxin-like 246 378 IPR036249 -
Bach12g00854 491 CDD PDI_b'_family 263 360 - -
Bach12g00854 491 Gene3D Glutaredoxin 19 135 - -
Bach12g00854 491 Gene3D Glutaredoxin 136 240 - -
Bach12g00854 491 PANTHER PROTEIN DISULFIDE ISOMERASE 13 467 - -
Bach12g00854 491 FunFam Protein disulfide-isomerase 246 375 - -
Bach12g00854 491 Pfam Thioredoxin-like domain 173 356 - -
Bach12g00854 491 Gene3D Glutaredoxin 376 488 - -
Bach12g00854 491 PRINTS Thioredoxin family signature 55 63 - -
Bach12g00854 491 PRINTS Thioredoxin family signature 63 72 - -
Bach12g00854 491 PRINTS Thioredoxin family signature 108 119 - -
Bach12g00854 491 ProSiteProfiles Thioredoxin domain profile. 17 146 IPR013766 -
Bach12g00854 491 CDD PDI_a_family 38 141 - -
Bach12g00854 491 SUPERFAMILY Thioredoxin-like 150 249 IPR036249 -
Bach12g00854 491 NCBIfam protein disulfide-isomerase domain 41 144 IPR005788 GO:0003756
Bach12g00854 491 ProSitePatterns Thioredoxin family active site. 401 419 IPR017937 -
Bach12g00854 491 SUPERFAMILY Thioredoxin-like 37 147 IPR036249 -
Bach12g00854 491 ProSitePatterns Thioredoxin family active site. 56 74 IPR017937 -
Bach12g00854 491 CDD PDI_b_family 149 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00854 Bach-Chr12 6031876 6035729 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00854 K09580 - gmx:100170705 781.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00854 12 6031876 6035729 Bach12g00854 12 6031876 6035729 ECH