Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00800 ATGGAAAACACCGACGTGTTCTTGGGCTTACACGACTTCCTCGAGCGCATGCGCCAACCCTCCGCCGCCGATTTTGTCAAGGCAATCAAAAGTTTTATCGTGTCATTTTCAAATAATGCACCTGATCCAGATAGGGATAGTGCCGCAGTACAAGAGTTCTTTGCTAAAATGGAAGCAGCTTTTAGGGCTCATCCACTTTGGGCCGGCTGCTCTGAGGAGGAGCTTGAGAGTGCCGGTGAGGGGCTGGAGAAGTATGTGATGACCAAGTTATTTACCCGTGTATTTGCATCACTTCCAGATGATGTAAAACTTGATGATCAACTTTCTGAAAAGATGGCTTTGATTCAACAGTTTATTCGACCAGAAAATCTAGATATCAAGCCAAACTTTCAGAATGAAACATCTTGGTTGCTTGCACAGAAAGAATTGCAAAAGATTAACATGTACAAGGCACCCAGAGACAAACTTGTGTGTATTCTGAATTGTTGCAAAGTTATCACTAACTTGCTGGTTAATGCCTCTGTTGCTTCAGATGGAAATCCTTTTGGGGCTGATGAATTTCTTCCTGTGCTAATTTATGTTACTATAAAGGCAAACCCACCGCAGCTACACTCAAATCTGCTTTATATTCAAAGATTTAGACGTCAATCTCGATTGATTGGAGAAGCAGCATACTTTTTTACAAATATTCTCTCTGCTGAGTCCTTCATCTCAAACATTGATGCCAAAGCCCTTTCACTGGATGAAACCGAGTTTGAGAGACATATGGAATCCGCCCGCGCCCTTCTTTCTGGGCTTTCAACTGATTTGCAAGATCCCTCCACTTTACCTGATCAGAGTTCTGGGTACCTTCCGAGAGCAGAGCCAATCAGACAAAAAAATAAAGCTTTGAATGATATTAAGGACCTAGCATTAGGAACCACGTCATCTGAAGCCAAATCTGATAGTAAGAAAGTAACTTTTGCAGATGAGTTACCGATCACAAAAGTTCCATCCCTCTCGGATTTGGAGAATAAAGGAGCAACTATCCTCTTGAAGGAGGATCAGATTAACGAAGTTTTCAAGGCGTATCCATATTTGTTTGCTCAAGTAGGTGACCTAACAGTCAGTGATGTGGAAGATCTGTTAAATAACTACAAACAACTTGTTTTCAAGTATGTCTGTCTTTCAAAAGGATTAGGTGTTGCTCCTGCACCCCATCCTCCTTCCAATTCACAAAATAACGTCCAACAACATGCTGAAACTACTATAGAGTCTTCAGATAGTGGACCTGATGAGCCAGATGATAAGTCACAAAAATCTACTCATAGGACAAAGGATAGTTCAGATAGTTCAGCTACAGTTTCAGTTAATGAGGAGAGAATCTTGGAATCCAATCTGCCACAGGATGAGGCATTAGAACCTCAGGGCGGGGACAAAGTGGAGGCTTCTAACTGA 1437 0.4196 MENTDVFLGLHDFLERMRQPSAADFVKAIKSFIVSFSNNAPDPDRDSAAVQEFFAKMEAAFRAHPLWAGCSEEELESAGEGLEKYVMTKLFTRVFASLPDDVKLDDQLSEKMALIQQFIRPENLDIKPNFQNETSWLLAQKELQKINMYKAPRDKLVCILNCCKVITNLLVNASVASDGNPFGADEFLPVLIYVTIKANPPQLHSNLLYIQRFRRQSRLIGEAAYFFTNILSAESFISNIDAKALSLDETEFERHMESARALLSGLSTDLQDPSTLPDQSSGYLPRAEPIRQKNKALNDIKDLALGTTSSEAKSDSKKVTFADELPITKVPSLSDLENKGATILLKEDQINEVFKAYPYLFAQVGDLTVSDVEDLLNNYKQLVFKYVCLSKGLGVAPAPHPPSNSQNNVQQHAETTIESSDSGPDEPDDKSQKSTHRTKDSSDSSATVSVNEERILESNLPQDEALEPQGGDKVEASN 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00800 478 SMART vps9_2 135 254 IPR003123 -
Bach12g00800 478 FunFam Vacuolar protein sorting-associated protein 9A 99 265 - -
Bach12g00800 478 Gene3D VPS9 domain 99 265 IPR037191 -
Bach12g00800 478 MobiDBLite consensus disorder prediction 441 456 - -
Bach12g00800 478 Pfam Domain of unknown function (DUF5601) 27 91 IPR041545 -
Bach12g00800 478 PANTHER RAB GDP/GTP EXCHANGE FACTOR 6 386 IPR045046 GO:0005085|GO:0016192
Bach12g00800 478 Gene3D - 17 97 - -
Bach12g00800 478 FunFam Vacuolar protein sorting-associated protein 9A 17 97 - -
Bach12g00800 478 SUPERFAMILY VPS9 domain 11 257 IPR037191 -
Bach12g00800 478 ProSiteProfiles VPS9 domain profile. 102 246 IPR003123 -
Bach12g00800 478 MobiDBLite consensus disorder prediction 398 478 - -
Bach12g00800 478 Pfam Vacuolar sorting protein 9 (VPS9) domain 138 241 IPR003123 -
Bach12g00800 478 MobiDBLite consensus disorder prediction 423 440 - -
Bach12g00800 478 MobiDBLite consensus disorder prediction 400 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00800 Bach-Chr12 5613851 5617759 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00800 K20131 - gmx:100810958 699.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00800 12 5613851 5617759 Bach12g00800 12 5613851 5617759 ECH