Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00798 TTTGTTTGGAGGCGTTATTTTCTTTCATTCTACTATCTTAACCAAACAAAAAAGGGGAAAAAGAAAATTCTTAATGGCTGCCTTGCTTTCGAATCAGTCTCTATTTGTTTCTAGTCCTTGTTCTTCTTCAATTGCTTCAAAGCCCTTTAAAGCCCTAAAACCCAAAATCCTTCCTTTTCGATCTCTTTCCAATACCAATCTTCTTCACCTCACTTGTGCCTGCAGACCTATCATTGGGTGTGCTAACAAGTCTTCCCTAGGTTGCAATGTTAATCGAAGGAGTATATTCAAGTCTTGTTTCGCTGCGCAGGATTCCATTCCAGCTACAAATGATGAAGGGGAGAACATTCAGCGTGATATTGAAGAGGCAGGTGATGAACAAGATCAGTATCCTTTATCTAGTTTAGTGGCCCTCATTGAAGCATACAGGGAAGCTATTGTTAATCGAGAAGAGAAGACTGTATCTCAGATTGAGGCAAGGATTTGCTCAATAGCAGATAAAAGAAATGAACTGTTGAAAAAATTATCAGATTTCTCAGAAGAGAAACTTGCTTCTAAGGAAAAATCTCTTCGCCTTCAAGCAGATTTTGAAAATTTTAGGAAAAGGTCTGATAAAGAAAGGCTCAAGATACAGTCTGATGCCCAAACACAAGTTATTGAAAGACTTCTGCAGATAGTTGACAATTTTGACAGAGCCAAACAAAATATTAAACCAGCTACAGAGAAAGAAAAAAAGATTGATATAAGTTATCAAGGTATTTACAAGCAATATGTAGAGATTATGAGGAGCCTTCATGTTTCTGTGGTAGCAACAGTGGGCAAGCCTTTTGATCCCTATGTGCACGAAGCCATTGCGAGGGAGAAGTCTCAAGATTTCAAGGAAGGGATTATAATTCAAGAATCTCGGCGTGGCTTTTTGCTCAGAGATCGACTTCTAAGGCCAGCGCTGGTCAAGGTCTCCTTAGGGCCTGGAAATAAGAAATCTACACGGCCTCCTGGCATTTCCAAAGAGCAGCCTGCAACAGCCGCTGGAATGGATGAAAGATAG 1048 0.3998 MAALLSNQSLFVSSPCSSSIASKPFKALKPKILPFRSLSNTNLLHLTCACRPIIGCANKSSLGCNVNRRSIFKSCFAAQDSIPATNDEGENIQRDIEEAGDEQDQYPLSSLVALIEAYREAIVNREEKTVSQIEARICSIADKRNELLKKLSDFSEEKLASKEKSLRLQADFENFRKRSDKERLKIQSDAQTQVIERLLQIVDNFDRAKQNIKPATEKEKKIDISYQGIYKQYVEIMRSLHVSVVATVGKPFDPYVHEAIAREKSQDFKEGIIIQESRRGFLLRDRLLRPALVKVSLGPGNKKSTRPPGISKEQPATAAGMDER 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00798 324 Gene3D - 123 239 IPR013805 -
Bach12g00798 324 FunFam Protein GrpE 241 296 - -
Bach12g00798 324 Pfam GrpE 139 296 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Bach12g00798 324 PANTHER GRPE PROTEIN 97 302 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Bach12g00798 324 SUPERFAMILY Head domain of nucleotide exchange factor GrpE 243 297 IPR009012 GO:0006457
Bach12g00798 324 SUPERFAMILY Coiled-coil domain of nucleotide exchange factor GrpE 145 238 IPR013805 -
Bach12g00798 324 CDD GrpE 162 295 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Bach12g00798 324 ProSitePatterns grpE protein signature. 252 295 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Bach12g00798 324 Gene3D Head domain of nucleotide exchange factor GrpE 242 296 IPR009012 GO:0006457
Bach12g00798 324 PRINTS GrpE protein signature 249 264 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Bach12g00798 324 PRINTS GrpE protein signature 276 295 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Bach12g00798 324 PRINTS GrpE protein signature 194 209 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Bach12g00798 324 PRINTS GrpE protein signature 166 182 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Bach12g00798 324 MobiDBLite consensus disorder prediction 298 324 - -
Bach12g00798 324 Hamap Protein GrpE [grpE]. 86 297 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00798 Bach-Chr12 5605582 5607690 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00798 K03687 - gmx:100809893 348.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00798 12 5605582 5607690 Bach12g00798 12 5605582 5607690 ECH