Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00789 ATGGGTTCTTTCTTGAGTATGGCTGGTACGAAGTCTAATAGAATTGAGCGTGATGAGGTCTGTCAGAATGAGACCAACAAGAGGCGAAGAATGCCATCTACCTTTGAGGACAGTCCAAGATTAATTCCAAGTCTCCCTGATGAGTTGTCGCTTCAAATTATTGCTAGACTTCCTAGAATTTGCTACTTCAATGTGAGACTGGTATCACGGAAGTGGAAGGCAACTGTCATGAGTTCTGAGCTATATAAACTGAGAAAAGAACTTGGAACAACTGAAGAGTGGATATATCTGTTGATTAAGGTTGGAGAAGATAAGCTTTTGTGGCATGCTCTAGACCCGCTTTCTCGGAAATGGCAGAGACTGCCCACTATGCCCAATGATGGTAACGAAGAAGAATCTAGAAAGGGTTCTTCTAGGCTTTGGATGTGGAACATGGTGGAGGGTATTAGAATTGCTGAAGTTATTAGAGGTTTGCTTGGACAGAAGGAGGCATTGGATGAAATGCCCTTTTGTGGTTGTGCCATTGGAGCTGTTGATGGATGCCTCTATGTTCTTGGTGGATTCGCTAAAGCTTCAACTAAGAGGTGTGTCTGGCGATTTGATCCAATACAAAATACATGGAGCAAGGTGACTTCTATGTCTACAGCTAGGGCTTATTGCAAGACAGGAATCTTAAATAACAAGCTTTATGTTGTTGGAGGGGTTAGTCAAGGTCAAGCTGGATTGATTCCTCTTCAGTCTGCAGAAGTTTTTGACCCCTCTACCGATACATGGTCCAATGTGCCAAGCATGCCATTCTCAAGAGCTCACTTCCTACCCACTGCTTTTTTGGCTGACATGTTAAAACCTATTGCCACCGGATTGACCTCGTACAAGGGTAAGTTGTGCGTTCCTCAAAGTTTGTATTCGTGGCCCTTTTTTGTTGATGTTGGGGGAGAAATCTATGATCCTCAAACAAATTCATGGATGGAAATGCCAACTGGGATGGGTGAGGGTTGGCCGACACGGCAAGCGGGTACTAAACTGAGTGTTGTAGTGGAGGGCGAATTATATGCTTTTGATCCTTCTAATTCTCTGGATAGCGGAAAGATCAAGGTATATGATCAAGGAGAAGACGCCTGGAAAGTAGTTATTGGAAAAGTCCCTATCAATGATCCTACTGATTCAGAGTCTCCATATTTACTTGCTGGTTTCCATGGAAAGCTTCATGTCATTACAAAAGATGTCAATCATGATGTTGTTGTTCTGCGGGCTGACCTGCGCAAGGATTTGGATCCATTACCATCAACCTCTACTACTCTACCATCTAATTCCGTACGTAAATTTACTGAACCGGTTACAGAATCGGATGCGGTTGTTTGGAGAGTAGTCGCCAATCGGGATTTCGGACCAGCTGAATTAGTCAGTTGCCAAGTTATTGATATATAG 1428 0.4335 MGSFLSMAGTKSNRIERDEVCQNETNKRRRMPSTFEDSPRLIPSLPDELSLQIIARLPRICYFNVRLVSRKWKATVMSSELYKLRKELGTTEEWIYLLIKVGEDKLLWHALDPLSRKWQRLPTMPNDGNEEESRKGSSRLWMWNMVEGIRIAEVIRGLLGQKEALDEMPFCGCAIGAVDGCLYVLGGFAKASTKRCVWRFDPIQNTWSKVTSMSTARAYCKTGILNNKLYVVGGVSQGQAGLIPLQSAEVFDPSTDTWSNVPSMPFSRAHFLPTAFLADMLKPIATGLTSYKGKLCVPQSLYSWPFFVDVGGEIYDPQTNSWMEMPTGMGEGWPTRQAGTKLSVVVEGELYAFDPSNSLDSGKIKVYDQGEDAWKVVIGKVPINDPTDSESPYLLAGFHGKLHVITKDVNHDVVVLRADLRKDLDPLPSTSTTLPSNSVRKFTEPVTESDAVVWRVVANRDFGPAELVSCQVIDI 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00789 475 Gene3D - 40 95 - -
Bach12g00789 475 SUPERFAMILY Kelch motif 96 406 IPR015915 GO:0005515
Bach12g00789 475 ProSiteProfiles F-box domain profile. 39 85 IPR001810 GO:0005515
Bach12g00789 475 CDD F-box_AtAFR-like 41 85 - -
Bach12g00789 475 SUPERFAMILY F-box domain 40 143 IPR036047 GO:0005515
Bach12g00789 475 Pfam F-box-like 42 83 IPR001810 GO:0005515
Bach12g00789 475 Pfam Kelch motif 169 214 IPR006652 GO:0005515
Bach12g00789 475 Pfam Kelch motif 216 265 IPR006652 GO:0005515
Bach12g00789 475 SMART fbox_2 45 85 IPR001810 GO:0005515
Bach12g00789 475 SMART kelc_smart 181 227 IPR006652 GO:0005515
Bach12g00789 475 SMART kelc_smart 228 278 IPR006652 GO:0005515
Bach12g00789 475 Gene3D - 99 383 IPR015915 GO:0005515
Bach12g00789 475 PANTHER OS02G0202900 PROTEIN 22 474 IPR045887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00789 Bach-Chr12 5535459 5536886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00789 36 263 Miscellaneous Gene Families AT4G33900 25.217 3.50e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00789 - - gmx:100806691 784.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00789 12 5535459 5536886 Bach12g00789 12 5535459 5536886 ECH