Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00715 ATGAGATGCCTATACTTTGCCCACTCACTCACTCAAACTCATAGCTCGTTCTACCATACCAAATTCTACAGCTCTTTCCAATTCCAGAACCCTCCCTTTAAACTCTGCTCCGGTATTCTAAGACCAATTTCCAGACCCCGCGTTCATGCTTTCTGTACTTTGTCCTCTGAAGCCAGAGCTGACAGGGTAGCTGCACTGAAACAAAGCATGGATGCCCACGACTCCATATCGTTCCTCACGCAGCGAGAAGCCGCCGAGATAGATGAGACACTCATGGGTCCTCTTGGGTTTAGCGTCGACCAATTGATGTTGTATGTGAAAATGATTTCTTTTTTCTTTTCCCAGGTTTATAAACCAAGTGAATATGGTCGTGTTCTTCTAATCTGTGGTCCTGGGAACAATGGTGGTGATGGTCTGGTGGCTGCCCGTCACCTGTATCACTTTGGATATAAGACCTTTATCTGCTATCCTAAACGTACCCCCAAACCTCTCTACGCTGGATTGGTTACTCAGCTCGAATCACTGTCAATCCCATTCTTATCAGTGGAAGATCTATCGTTGGACTTGTCAAAAGACTTTGACGTTATAGTTGATGCAATGTTTGGATTCTCTTTCCATGGTTCTCCAAGGCCACCTTTTGATGATCTGATCAAAAGACTTGTTTCTTTACATAATTCTGATCAAGTTCATCAAAGAAGATCGGTTATAGTCTCTGTAGATATTCCTTCTGGCTGGCATGTTGAAGAAGGTGATGTTAATGGCGAAGGCATTAAACCTGACATGTTGGTTTCTTTGACTGCCCCAAAATTATGTGCCAAGAAATTTAGTGGTCCACACCACTTTCTAGGCGGCAGATTTGTTCCACCCTCTATTGCAGAGAAATACAAGCTTCATCTCCCACCTTATCCTGAAACTTCCATGTGTGTCCGAATTGGCAAGCCACCTCAAATTGATATTTCAGCTCTGAGAGAGAACTATATCTCTCCAGAATTTCTGGAAAAGGAGGTGGAGGCAGATCCCATTAAACAGTTCCTTAAATGGTTTGATGATGCATTGACTGCTAGATTGAGGGAACCAAATGCTATGGCCTTATCAACAGTAGGAAAGGATGGAAAACCCTCATCTCGAATGGTGCTGCTAAAAGGCGTTGACAAGGATGGGCTTGTGTGGTACACAAACTATGAAAGTCACAAGGCACATGAATTAGCCGAAAATCCTCACGCATCACTTCTTTTCTATTGGGATGGTCTAAACCGCCAGGTACGAGTGGAGGGATCTGTTAAGAAAGTCTCTGAAGAGGAATCAGAACAGTATTTCCACAGCCGTCCTCGAGGAAGTCAGCTTGGAGCAATAGTTAGCAAGCAGAGTACTGTAGTGCCAGGAAGGCATGTTCTTTACCAGGAGTACAAAGAATTGGAGCAAAAGTTTTCTGACGGAAGTTTGATCCCTAAACCTAAGAACTGGGGAGGATACAGGCTAACACCTCGACTATTTGAATTTTGGCAAGGACAGCCGTCTCGCTTACATGACAGGCTGCAGTATTCTCCCTATGAGATTAATGGACAACTAGCATGGAAGATTGAGAGATTGGCTCCCTGATCGTG 1604 0.442 MRCLYFAHSLTQTHSSFYHTKFYSSFQFQNPPFKLCSGILRPISRPRVHAFCTLSSEARADRVAALKQSMDAHDSISFLTQREAAEIDETLMGPLGFSVDQLMLYVKMISFFFSQVYKPSEYGRVLLICGPGNNGGDGLVAARHLYHFGYKTFICYPKRTPKPLYAGLVTQLESLSIPFLSVEDLSLDLSKDFDVIVDAMFGFSFHGSPRPPFDDLIKRLVSLHNSDQVHQRRSVIVSVDIPSGWHVEEGDVNGEGIKPDMLVSLTAPKLCAKKFSGPHHFLGGRFVPPSIAEKYKLHLPPYPETSMCVRIGKPPQIDISALRENYISPEFLEKEVEADPIKQFLKWFDDALTARLREPNAMALSTVGKDGKPSSRMVLLKGVDKDGLVWYTNYESHKAHELAENPHASLLFYWDGLNRQVRVEGSVKKVSEEESEQYFHSRPRGSQLGAIVSKQSTVVPGRHVLYQEYKELEQKFSDGSLIPKPKNWGGYRLTPRLFEFWQGQPSRLHDRLQYSPYEINGQLAWKIERLAP 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00715 532 ProSitePatterns Pyridoxamine 5'-phosphate oxidase signature. 498 511 IPR019740 GO:0016638
Bach12g00715 532 Pfam Pyridoxamine 5'-phosphate oxidase 348 434 IPR011576 -
Bach12g00715 532 NCBIfam NAD(P)H-hydrate epimerase 80 276 IPR004443 -
Bach12g00715 532 SUPERFAMILY FMN-binding split barrel 332 532 - -
Bach12g00715 532 PANTHER PYRIDOXINE-5-PHOSPHATE OXIDASE 318 532 IPR000659 GO:0004733|GO:0008615|GO:0010181
Bach12g00715 532 NCBIfam pyridoxamine 5'-phosphate oxidase 339 532 IPR000659 GO:0004733|GO:0008615|GO:0010181
Bach12g00715 532 Gene3D - 326 521 IPR012349 -
Bach12g00715 532 ProSiteProfiles YjeF N-terminal domain profile. 84 299 IPR004443 -
Bach12g00715 532 Gene3D - 75 316 IPR036652 -
Bach12g00715 532 FunFam NAD(P)H-hydrate epimerase 76 316 - -
Bach12g00715 532 Pfam YjeF-related protein N-terminus 111 271 IPR004443 -
Bach12g00715 532 Pfam Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 488 532 IPR019576 -
Bach12g00715 532 SUPERFAMILY YjeF N-terminal domain-like 78 305 IPR036652 -
Bach12g00715 532 Hamap Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 325 532 IPR000659 GO:0004733|GO:0008615|GO:0010181
Bach12g00715 532 FunFam NAD(P)H-hydrate epimerase 333 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00715 Bach-Chr12 5041014 5046002 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00715 K23998 - gmx:100795497 817.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00715 12 5041014 5046002 Bach12g00715 12 5041014 5046002 ECH