Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00702 ATGCATGTTACCGGGGATCTAGGGTTTTCGAGCCTGGTCCTTGTGGTGGTTTGGTTGGTAATACCTGTGATCGGGTTTGTAATTCGCCGGAAATTTCAGCATGCAGTGGCCAGAAAGGAGGAGATCAAGAGGCTTTTGATTTTGGCATCAGAGGAGGCTGCTAGGGCCGAGCTCGAGGCTTCCTATGAGTACGGCAGCGTTGCTGTTCCTAAGAATAATCAATGCGCAGTGTGCTACTGCCCCGCCACAGCGCGGTGTGGCCGGTGCAAAGCGATTCGCTACTGTTCTAGTGACTGCCAAATTATTCATTGGCGTCAAGGTCACAAGGAAGAATGCTGTCCTCCCAGCACCACTCACCAGGGTGATGATTTTGTAAGTGATTTTGGCAAGAAGGCATCAGAACAAGATGGACTTGGAATTCATGGTGAGGTTAGCAGTCTGGGCAATAAGGCAGCAGAACAAGATCACTTTGGAATTCATGTTGAGAACAATGTGTTTGAGGTCGCACCTTCTAAACTATCCACTAAGAAACCCCCATCAATTGATATTAGTTGTTCTCCTGAAGTTTCACCCGGAAAGGATGACAATAGTAGAGTTGAGTCTCTTGCCGATGGAAATATAGTAGATTCTAATTCTGACTCATCTAGCAACTCATTTTCTGGATTCTCGGCTTCCAATACTTGTAGTGAATCATCTGATGATGCGTCTGTCTGCGAGAGTATTATCTCAACTGAGCATGAGAAGTCCGAGGAACATATTTTTGTGGATCCCACCCTTCACATGCTTGATACCACTTCGAGTGATAATAGCATGGGCGTAACCATGTCATCATCACCAAAGTTTGTTACTTCACTTGATTCTGTAGATGTTTTTTCTACAATGCATAAATTAAATCAAACTAGACCTGGTTTGAGTGAAGAAGAGAGTAAGCTTGCATCAAATGGTACTTCAGGTTTGAGAACATGCAAAGGGGCAATGAATGAGCCTTGTATGGTTTCTGCTGGTTTCTGGGATAAAACTCTTGATTCCGAGGGATCGACTGGTTGTGCTGATGGTGATTCTCTTTCTTCCCGTTCCAATAAATCCACTGGAAGCAAGGAATCTGAATCTGGATCCTCATATTGCTTTTCATTCAAAATGGTGGCTCCCTTAGATGCGCGCAATCCTGAGGAAAAAAATTCTGTTTCTGATTATTCTTTTATGAACTCTGTTGAGAATAATATGCCAAGTGCAGGATCGGCATTACCAGATAATGGCAGCAAGGAGTCTTCAAAACCGAGGAGCTTATCCTTCACAAACAGCAAAGTGCCTAATGTCTTGAATTTTGGTGATACCAGTCATTCTGATCTGTTGGAGTCTAGACCTTATGTCCATCAATTTTCTCGTTTGGGTGAAGATTCTGGGTGTACTGATTCTTCAACCACCAAAAAGTGGCAGTCAGTAGAGTCGAAGGTTTCAAATCATGTTGTGGATGACCCCCGTAGCAATTCACAGAAGTTGACGTCTGTTGAAGTTAGACATATGCCGTGTGCATTTGCTGATGCTGTGTTAGATTCTAGAACTGAAGAGAATGCACATTCCAGGACAAAATCTGGTAATAATGGTGTTCAATCTAGTACTTCTCCTTCATCTCAAGTTGCAAGCTGGTCCTCAAATTCTAAGAATGGATTGAAAACATCTGTATTGAAAGTTGTTGATCAGTTTAGAGGATCAAATCCATCAAAACGGTCCCCACTAGCTGTTGGGGGTGATATTGCTGGAAGATACAGTGACAAGGGGCTCTTTCCATATGACTTGTTTGTCAAGCTTTTTAATTGGAACAAGATAGAGTTGCGACCATTTGGTCTCATAAATTGTGGTAACAGCTGTTATGCTAATGCTGTACTCCAGTGCTTGGCATTTTCACCTCCCTTGACTGCTTATTTGCTTCAAGGACTTCATTCTAAAGCATGTGTAAAGAAAAAATGGTGTTTCACCTGTGAGTTTGAAAGTTTGGTTTTGAAGGCAAAAGAAGGGAAATCTCCACTCTCTCCGATGGGCATCCTCTCCCAACTACAGAATATCGGGAGTCAACTTGGTACTGGGAGAGAAGAAGATGCACATGAATTTTTAAGGTCGCATGTTATTGACACAATGCAATCGACTTGCCTTGTGGAAGCTGGGATTGATGCATCAGGCTCATTGGAAGAGGAAACAACTTTAATGGGTCTAACATTTGGAGGCTACCTTCGGTCAAAGATAAAATGCATGAAATGCGGGGGTAAGTCTGAGCGTCAAGAGAGGATGATGGATATAACTGTTGAGATTGGAGGAGAGATAGCAACCCTGGAGGAGGCTTTACGACAATTTACAAAAACTGAGATACTGGATGGAGAAAACATGTACCATTGCGTCAGCAGGTGTAAATCTTATGAGAAGGCCAAGAAGAAAATGACAATTTCAGAGGCACCTAATGTTCTGACTGTTGCATTAAAGAGATTTAAGTGTGGAAGATTTGGGAAGCTTAACAAGCCTGTTCGGTTTCCTGAAATACTTGACCTAGCACCTTTTATGAGTGGGACTAGCGACAAATCACCTATATACAGGCTCTACGGGGCAATTGTTCACTTAGATGTCATGAATGCTGCATTTTCTGGTCACTATGTGTGCTACGTGAAGAATTTCCAGAATAAGTGGTACAAGGTTGATGACAGCTTGGTGACAGCTGTTGAATTGGAGAGAGTCTTGACAAAAGGAGCATACATGCTACTCTATGCAAGGTGCTCACCAAGGGCCCCAAGATTTATAAGGAACATGATAGTGTCTTCTGATTCAAAAAGTAAAGCTGTTAATGGAAGGACTACCCTTTTGAAATCTAGACATGCATCTGCAAACTCTAGTGTAGCTGAATGTTTCAATGGTTCGGTTTCTCCAGATAGTTCACCCACCATAGACTCTTTCTATTCAAAGTTTCATCGCCTGAGAAGGATTTTGGAAGAAGACTCATCAAGTGATAATTCATCACTTATCAGCAATAATTCTGATGAAGGTTCTTGCAGTACTGACAGCACCCGTGATTCAACCAGCACGGAGGACTTATCGGATTATATTTTTGGTGATTCAGGACTGGGCTGCAACAGCATTTGGAGGAATTCTGATTCTGACACTTCATCATCTTCCTCTTCTCCCATGTACTCTAGACATTCACCCCTTGCTGATATGGACCGGTATGCTTCTGGTTCTCCAGATGCAACTGGGTTGCAAACTCGCACCAATTTCCGTAAGGAGGTAGATGATGGTCTTTTATATAGGCGCTCTACTGATATAAACGGGATGGTGGGAAGGGAGGAAGGTGTTTCTCTTAGGCATTCTGACACAAGTATGGAGCATAGGAAGTTAGATAAGAGTAGAAGTAGCGTTAGTGGTTTTAGGAAAACTGACTCTTTTCAGAGTTTAGGATCTAACCAGTTTAATGATATAAACTCTGGTGTATCATGTAGAAAGTCGAGGGAAAGAACGGGTTAA 3504 0.4258 MHVTGDLGFSSLVLVVVWLVIPVIGFVIRRKFQHAVARKEEIKRLLILASEEAARAELEASYEYGSVAVPKNNQCAVCYCPATARCGRCKAIRYCSSDCQIIHWRQGHKEECCPPSTTHQGDDFVSDFGKKASEQDGLGIHGEVSSLGNKAAEQDHFGIHVENNVFEVAPSKLSTKKPPSIDISCSPEVSPGKDDNSRVESLADGNIVDSNSDSSSNSFSGFSASNTCSESSDDASVCESIISTEHEKSEEHIFVDPTLHMLDTTSSDNSMGVTMSSSPKFVTSLDSVDVFSTMHKLNQTRPGLSEEESKLASNGTSGLRTCKGAMNEPCMVSAGFWDKTLDSEGSTGCADGDSLSSRSNKSTGSKESESGSSYCFSFKMVAPLDARNPEEKNSVSDYSFMNSVENNMPSAGSALPDNGSKESSKPRSLSFTNSKVPNVLNFGDTSHSDLLESRPYVHQFSRLGEDSGCTDSSTTKKWQSVESKVSNHVVDDPRSNSQKLTSVEVRHMPCAFADAVLDSRTEENAHSRTKSGNNGVQSSTSPSSQVASWSSNSKNGLKTSVLKVVDQFRGSNPSKRSPLAVGGDIAGRYSDKGLFPYDLFVKLFNWNKIELRPFGLINCGNSCYANAVLQCLAFSPPLTAYLLQGLHSKACVKKKWCFTCEFESLVLKAKEGKSPLSPMGILSQLQNIGSQLGTGREEDAHEFLRSHVIDTMQSTCLVEAGIDASGSLEEETTLMGLTFGGYLRSKIKCMKCGGKSERQERMMDITVEIGGEIATLEEALRQFTKTEILDGENMYHCVSRCKSYEKAKKKMTISEAPNVLTVALKRFKCGRFGKLNKPVRFPEILDLAPFMSGTSDKSPIYRLYGAIVHLDVMNAAFSGHYVCYVKNFQNKWYKVDDSLVTAVELERVLTKGAYMLLYARCSPRAPRFIRNMIVSSDSKSKAVNGRTTLLKSRHASANSSVAECFNGSVSPDSSPTIDSFYSKFHRLRRILEEDSSSDNSSLISNNSDEGSCSTDSTRDSTSTEDLSDYIFGDSGLGCNSIWRNSDSDTSSSSSSPMYSRHSPLADMDRYASGSPDATGLQTRTNFRKEVDDGLLYRRSTDINGMVGREEGVSLRHSDTSMEHRKLDKSRSSVSGFRKTDSFQSLGSNQFNDINSGVSCRKSRERTG 1167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00702 1167 Pfam Ubiquitin carboxyl-terminal hydrolase 614 918 IPR001394 GO:0004843|GO:0016579
Bach12g00702 1167 MobiDBLite consensus disorder prediction 203 232 - -
Bach12g00702 1167 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 615 630 IPR018200 GO:0004843|GO:0006511
Bach12g00702 1167 Gene3D - 65 115 - -
Bach12g00702 1167 MobiDBLite consensus disorder prediction 996 1026 - -
Bach12g00702 1167 MobiDBLite consensus disorder prediction 528 552 - -
Bach12g00702 1167 SUPERFAMILY Cysteine proteinases 611 924 IPR038765 -
Bach12g00702 1167 Coils Coil 39 59 - -
Bach12g00702 1167 Pfam MYND finger 75 112 IPR002893 -
Bach12g00702 1167 SUPERFAMILY HIT/MYND zinc finger-like 71 114 - -
Bach12g00702 1167 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 381 924 - -
Bach12g00702 1167 MobiDBLite consensus disorder prediction 995 1026 - -
Bach12g00702 1167 MobiDBLite consensus disorder prediction 347 371 - -
Bach12g00702 1167 MobiDBLite consensus disorder prediction 1045 1080 - -
Bach12g00702 1167 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 614 921 IPR028889 -
Bach12g00702 1167 MobiDBLite consensus disorder prediction 1045 1060 - -
Bach12g00702 1167 FunFam Ubiquitin carboxyl-terminal hydrolase 15 66 116 - -
Bach12g00702 1167 MobiDBLite consensus disorder prediction 172 232 - -
Bach12g00702 1167 MobiDBLite consensus disorder prediction 1116 1167 - -
Bach12g00702 1167 ProSiteProfiles Zinc finger MYND-type profile. 75 112 IPR002893 -
Bach12g00702 1167 FunFam Ubiquitin carboxyl-terminal hydrolase 15 608 929 - -
Bach12g00702 1167 MobiDBLite consensus disorder prediction 407 432 - -
Bach12g00702 1167 MobiDBLite consensus disorder prediction 1116 1134 - -
Bach12g00702 1167 Gene3D Cysteine proteinases 607 930 - -
Bach12g00702 1167 MobiDBLite consensus disorder prediction 1135 1157 - -
Bach12g00702 1167 MobiDBLite consensus disorder prediction 521 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00702 Bach-Chr12 4911264 4917410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00702 569 925 Miscellaneous Gene Families AT4G31670 51.117 1.32e-122 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00702 K11855 - gmx:100795674 1254.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00702 12 4911264 4917410 Bach12g00702 12 4911264 4917410 ECH