Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00661 ATGGCTGTTTCAACCAATTTCTCTGGTGCCAAAGTGGAGGCTTTATTGCTGAAATCTTCTTCCTCTTCATCAGCATCGTCGTCAATAGCCTCCACTGCTACCAATTTATCTGTTTTTGGAAAACCCAGAAGGACCCTGATTCAGAGAGGAGTAATTCGCTGCGAGGCTGCTGCTTCAGATGTAATGGTTAAATCTGATGATCCAAGCAATGCTAGCACCGTCTCCGCTCTTGAGCTGTTGAAGACTTCTGCAGCTGACAGGTATACAAAGGAAAGGAGCAGCATAGTGGTCATTGGGCTTAGTGTGCACACTGCACCTGTTGAAATGCGTGAAAAACTTGCCATTCCTGAAGCAGAATGGCCTCGAGCAATTGGAGAGCTGTGTAACTTAAATCACATTGAAGAAGCTGCTGTTCTGAGCACTTGCAACAGAATGGAGATATATGTTGTTGCTCTGTCACAGCACCGTGGTGTCAAAGAGGTCACTGAATGGATGTCAAAGACAAGTGGGGTCCCTGTTTCTGAGCTTCGTGAGCACCAATTTTTGCTTTACAACAAAGATGCTACACAGCATATTTTTGAAGTATCTGCCGGTCTAGATTCTCTTGTATTAGGAGAAGGTCAAATCCTTGCCCAAGTAAAGCAAGTTGTTAAAGTTGGACAAGGAGTTAATGGCTTTGGTAGAAACATAAGTGGGCTGTTCAAGCATGCAATCACTGTGGGGAAGAGAGTTAGAACTGAAACTAATATCGCTGCTGGGGCAGTTTCAGTAAGCTCAGCTGCTGTTGAATTGGCCTTGATGAAGCTACCTGAAGCTTCGCATGATAATGCTAGGATGTTAATTATTGGAGCTGGTAAGATGGGAAAGCTTGTGATCAAACATTTGGTGGCAAAAGGTTGCACAAAGATGGTGGTTGTCAATAGAACCGAGGAGAGAGTTGCAGCAATTCGTGAAGAATTTAAGGACATTGAGATAATCTACAGGTCCCTTTCAGCAATGCTCACCTGCATTGGTGAAGCAGATGTGGTTTTCACCAGCACAGCATCGGAAGACCCATTAATTTTAAAAGATCACGTTGAGCACCTTCCTCCTGCAAGTCAAGATGTTGGAGGCCGCCGTCTTTTCGTTGATATTTCTGTTCCTAGGAATGTTGGTTCATGTGTCTCAGATCTTGATTCTGTGCGAGTGTACAATGTTGATGACCTTAAAGAGGTTGTGGCTGCTAATAAAGAAGATCGGCTTAGAAAAGCAATGGAAGCTCAGGCGATCATCACTGAAGAATCAAAGCAATTTGAAGCTTGGAGAGACTCATTGGAAACTGTTCCTACCATCAAGAAATTGAGGGCTTATGCTGAAAGAATCAGGGTTGCTGAGCTTGAGAAGTGCTTAGGTAAGATGGGTGATGACATCCCAAAGAAGACAAACAGGGCTGTGGATGATCTTAGCAGGGGTATAGTGAATAAGCTGCTTCATGGCCCAATGCAACACCTGAGGTGTGATGGAAGTGATAGCCGGACTCTAAGTGAGACCCTTGAAAACATGCATGCTTTAAATAGAATGTTCAGCCTTGAGACTGAGATATCTGTTTTGGAGCAGAAAATTCGTGCCAAGGTGGAACAAAACCAGAAGAACTGA 1635 0.4404 MAVSTNFSGAKVEALLLKSSSSSSASSSIASTATNLSVFGKPRRTLIQRGVIRCEAAASDVMVKSDDPSNASTVSALELLKTSAADRYTKERSSIVVIGLSVHTAPVEMREKLAIPEAEWPRAIGELCNLNHIEEAAVLSTCNRMEIYVVALSQHRGVKEVTEWMSKTSGVPVSELREHQFLLYNKDATQHIFEVSAGLDSLVLGEGQILAQVKQVVKVGQGVNGFGRNISGLFKHAITVGKRVRTETNIAAGAVSVSSAAVELALMKLPEASHDNARMLIIGAGKMGKLVIKHLVAKGCTKMVVVNRTEERVAAIREEFKDIEIIYRSLSAMLTCIGEADVVFTSTASEDPLILKDHVEHLPPASQDVGGRRLFVDISVPRNVGSCVSDLDSVRVYNVDDLKEVVAANKEDRLRKAMEAQAIITEESKQFEAWRDSLETVPTIKKLRAYAERIRVAELEKCLGKMGDDIPKKTNRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLSETLENMHALNRMFSLETEISVLEQKIRAKVEQNQKN 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00661 544 Hamap Glutamyl-tRNA reductase [hemA]. 94 521 IPR000343 GO:0008883|GO:0033014|GO:0050661
Bach12g00661 544 Pfam Glutamyl-tRNAGlu reductase, dimerisation domain 419 523 IPR015896 GO:0008883|GO:0033014|GO:0050661
Bach12g00661 544 NCBIfam glutamyl-tRNA reductase 95 503 IPR000343 GO:0008883|GO:0033014|GO:0050661
Bach12g00661 544 Coils Coil 306 326 - -
Bach12g00661 544 PANTHER GLUTAMYL-TRNA REDUCTASE 1, CHLOROPLASTIC 2 540 - -
Bach12g00661 544 SUPERFAMILY Glutamyl tRNA-reductase catalytic, N-terminal domain 94 250 IPR036343 GO:0008883|GO:0033014|GO:0050661
Bach12g00661 544 Gene3D - 254 406 - -
Bach12g00661 544 Pfam Glutamyl-tRNAGlu reductase, N-terminal domain 98 248 IPR015895 GO:0008883|GO:0033014|GO:0050661
Bach12g00661 544 Gene3D - 93 253 IPR036343 GO:0008883|GO:0033014|GO:0050661
Bach12g00661 544 Pfam Shikimate / quinate 5-dehydrogenase 263 405 IPR006151 -
Bach12g00661 544 SUPERFAMILY Glutamyl tRNA-reductase dimerization domain 417 503 IPR036453 GO:0008883|GO:0033014|GO:0050661
Bach12g00661 544 CDD NAD_bind_Glutamyl_tRNA_reduct 95 417 - -
Bach12g00661 544 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 253 413 IPR036291 -
Bach12g00661 544 ProSitePatterns Glutamyl-tRNA reductase signature. 191 214 IPR018214 GO:0008883
Bach12g00661 544 FunFam Glutamyl-tRNA reductase 253 412 - -
Bach12g00661 544 FunFam Glutamyl-tRNA reductase 94 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00661 Bach-Chr12 4560067 4562509 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00661 K02492 - qsa:O6P43_015417 885.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00661 12 4560067 4562509 Bach12g00661 12 4560067 4562509 ECH