Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00641 ATGGTGGGTTCCGAAAGTCCGAACGGTGCTTCACCGCCGCCACCTCAACAAGCGAAGACGTATGGGATCACAAAACCTATCTCTCTTGCGGGTCCTACCGAGGCGGATTTTCATCGCAACAAGGAACTGGAGAGGTTTTTGGTTGATTCTGGTCTTTACGAGAGCAAAGAAGAAGCTGCAAAGAGAGAAGAGGTCCTTGGGCGCCTTGACGAGATCGTAAAAAGCTGGGTGAAGCAGTTGACCCGCCAACGAGGCTACACAGAGCAGATGGTGGAGGATGCAAATGCTGTCATTTTCACTTTTGGTTCCTACAGACTAGGGGTACATGGACCTGGAGCTGACATAGACACTTTATGTGTTGGTCCTTCTTATGTGAATCGTGAGGAAGACTTCTTTATCATTTTGCATGACATCCTGGGTGAAATGGAAGAAGTTACTGAACTTCAACCAGTTACTGATGCTCATGTCCCAGTATTGAAATTCAAGTTCCAGGGAATATCAATTGATTTGCTCTATGCAAGTATATCACTTTTGGTTGTTCCACAAGACCTTGATATCTCAAATGAGTCTGTGCTGTCTGATGTTGACGAGCCAACTGCTCGAAGCCTCAATGGCTGCCGGGTGGCAGATCAAATTCTGAAGCTTGTTCCAAATGTTGAGCACTTCTGCACTACGTTGAGATGTTTGAAATTTTGGGCTAAAAGGCGCGGTGTTTATTCAAATGTTACTGGATTCCTTGGCGGTGTAAATTGGGCTATTTTAGTTGCTCGAGTTTGCCAGCTTTATCCTTATGCAATTCCTAGTATGTTGGTTTCTCGATTCTTCAGGGTATATACACAGTGGCGATGGCCAAACCCTGTAATGCTATGTGCTATAGAAGAGAATGAACTAGGTTTCTCTATGTGGGATCCACGTAGAAATCCTCGGGACAGATTTCATCACATGCCAATAATTACTCCCGCATACCCTTGCATGAATTCCAGCTACAATGTCTCAGCAAGCACTCTTCGTGTTATGGTGGAACAGTTCTGTCATGGTAACAGGATCTGTGAGGAAATTGAGCTTAACAAATCCCAGTGGAGTGCTCTTTTTGAGCCTTACCCTTTTTTTGAGGCGTACAAAAACTATCTACAAGTGGACATAGTTGCAGTAGATGCTGATGATTTACTTGCTTGGAAAGGCTGGGTAGAATCTCGGTTGAGACAGCTTACCTTGAAGATAGAGCGGGACACAAATGGGATGTTGCAGTGTCATCCTTATCCGCATGAGCATGTGGACTCATCTAAGCCTTGTCCACATAGTGCCTTCTTCATGGGCTTGCAAAGGAAAGAGGGAGTCAGAGGTCAGGAAGGGCAGCAATTTGATATACGTGGAACAGTTGATGAATTTAGGCAAGAGATAAACATGTATTTATATTGGAAACCAGGGATGGAAATTTATGTTTCTCATGTTCGTCGAAAGCAGCTTCCTGCATTTCTTTTTCCATATGGTTATAAAAGGACTCGGACATCAAGGCATCTGAACCATTCTACTGAGAAAATGGGTGAAGACACAAAGAGCCACACTGTGTCTGCTGAAAGGTGCATCAAGAGGAAAAATGGTCCTGAAAGGGTTGATGAGAAACCAGGAAAACCAGAGAAACAGGCCTCCATTAGTCCACAGAGGATAGGTTCTATCTCACCAGAATGCATTAGTAGTGGATCTGGTGCTGCATCTCAGATGAGTATTGGTTCTATAGAAGGAATTAGGTTAGGAAATTCAACAACCACAGATGCAGATAACAATTCTGAAACTAAGTTGTCTGATGTATACCTTGGAGGCAGAATGCGTACTCTAGGGACTAACAGACAGAAAGTTGGTGATACATTTCAGAATGGAGTCATTGGGTACAAAGTTCAGAATTTGGATTTAGATTGCTTGGGAAGTGCTGAAAGTGCATCCACCAAAACCTTGCGGATCTGTAAAGGGGGTGCTGTTGATATGGATCAACAACTAGTCAAAGTTTGTAATTTGATAAGGGCTGAAAATGCAGAATATGTACCAAATGCTGGTGCCCAGAACCTCAATCACGAGATCCAGATACCCTTCTGA 2091 0.4376 MVGSESPNGASPPPPQQAKTYGITKPISLAGPTEADFHRNKELERFLVDSGLYESKEEAAKREEVLGRLDEIVKSWVKQLTRQRGYTEQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHDILGEMEEVTELQPVTDAHVPVLKFKFQGISIDLLYASISLLVVPQDLDISNESVLSDVDEPTARSLNGCRVADQILKLVPNVEHFCTTLRCLKFWAKRRGVYSNVTGFLGGVNWAILVARVCQLYPYAIPSMLVSRFFRVYTQWRWPNPVMLCAIEENELGFSMWDPRRNPRDRFHHMPIITPAYPCMNSSYNVSASTLRVMVEQFCHGNRICEEIELNKSQWSALFEPYPFFEAYKNYLQVDIVAVDADDLLAWKGWVESRLRQLTLKIERDTNGMLQCHPYPHEHVDSSKPCPHSAFFMGLQRKEGVRGQEGQQFDIRGTVDEFRQEINMYLYWKPGMEIYVSHVRRKQLPAFLFPYGYKRTRTSRHLNHSTEKMGEDTKSHTVSAERCIKRKNGPERVDEKPGKPEKQASISPQRIGSISPECISSGSGAASQMSIGSIEGIRLGNSTTTDADNNSETKLSDVYLGGRMRTLGTNRQKVGDTFQNGVIGYKVQNLDLDCLGSAESASTKTLRICKGGAVDMDQQLVKVCNLIRAENAEYVPNAGAQNLNHEIQIPF 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00641 696 MobiDBLite consensus disorder prediction 505 571 - -
Bach12g00641 696 FunFam Putative poly(A) polymerase gamma 181 364 - -
Bach12g00641 696 SUPERFAMILY Nucleotidyltransferase 19 215 IPR043519 -
Bach12g00641 696 Gene3D Beta Polymerase, domain 2 54 210 IPR043519 -
Bach12g00641 696 Pfam Nucleotidyltransferase domain 95 164 IPR002934 GO:0016779
Bach12g00641 696 SUPERFAMILY PAP/OAS1 substrate-binding domain 217 366 - -
Bach12g00641 696 FunFam Poly(A) polymerase alpha, putative 54 210 - -
Bach12g00641 696 FunFam Nuclear poly(A) polymerase 4 368 484 - -
Bach12g00641 696 Gene3D - 22 364 - -
Bach12g00641 696 Gene3D Poly(A) polymerase predicted RNA binding domain 368 484 - -
Bach12g00641 696 PANTHER POLY A POLYMERASE 10 528 - -
Bach12g00641 696 CDD NT_PAP_TUTase 61 216 - -
Bach12g00641 696 MobiDBLite consensus disorder prediction 551 571 - -
Bach12g00641 696 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 367 494 IPR011068 GO:0003723|GO:0016779|GO:0031123
Bach12g00641 696 MobiDBLite consensus disorder prediction 505 546 - -
Bach12g00641 696 Pfam Poly(A) polymerase predicted RNA binding domain 369 423 IPR007010 GO:0003723|GO:0043631
Bach12g00641 696 MobiDBLite consensus disorder prediction 1 25 - -
Bach12g00641 696 Pfam Poly(A) polymerase central domain 22 366 IPR007012 GO:0043631|GO:1990817
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00641 Bach-Chr12 4381906 4385646 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00641 K14376 - gmx:100802620 1057.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00641 12 4381906 4385646 Bach12g00641 12 4381906 4385646 ECH