Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00613 ATGTTGTCTGGAGCATCATATGGTCTGAGGAAGATTTTAAATTCCGACGTAGTTATTGCTTTGCAAAGGAAAAAGGTGCTTGAGGTCAGCAAGACTAACGACTCTTCTGAACTCAACTTTGACACAAAAACAGATTCGGATTGTAATTCTTTCAGATTTCAGTTGAAGAAGTCATTCCGAGGTTTGATTTTTGGATCTGCGTTAACTCGAGTAGTAATCAGTATGCAGGCATCGCGGGCAAGGCTCTTCAAGGAGTACAAAGAGGTGCAGCGGGAGAAAGCAGTTGATCCTGATATTCAGCTAGTCTGTGATGATTCTAACATTTTTAAATGGACAGCCCTTATCAAGGGACCATCAGAGACTCCTTTTGAGGGTGGTGTCTTCCAGCTTGCATTTGCTATCCCAGAGCAATATCCTCTACAACCTCCTCAAGTGAGGTTCTTGACTAAGATATTTCACCCAAATGTGCATTTTAAGACGGGGGAGATTTGTCTTGATATATTGAAAAATGCTTGGAGCCCAGCTTGGACACTTCAGTCTGTCTGTAGGGCTATAATTGCTCTGATGGCCCATCCGGAACCTGACAGCCCACTGAATTGTGATTCAGGTAATCTCTTGCGTTCTGGTGATGTTAGAGGGTACCAGTCCATGGCAAGGATGTACACTAGGCTTGCAGCAATGCCAAAGAAAGGCTGAATGATTTTAGATAATTTGGTTCCTGCGTTGTCTTAAGCTATGGGAATGTTCTTTCCTATATGTAAGGATATATGATGTGTTTCTATAATTGTATTTGAAGACATCACGACAAACTATCAATTGACAACAGCAGTTCTTTACTCTATCTATATA 849 0.4146 MLSGASYGLRKILNSDVVIALQRKKVLEVSKTNDSSELNFDTKTDSDCNSFRFQLKKSFRGLIFGSALTRVVISMQASRARLFKEYKEVQREKAVDPDIQLVCDDSNIFKWTALIKGPSETPFEGGVFQLAFAIPEQYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRSGDVRGYQSMARMYTRLAAMPKKG 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00613 231 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 77 227 IPR000608 -
Bach12g00613 231 SUPERFAMILY UBC-like 77 227 IPR016135 -
Bach12g00613 231 CDD UBCc 81 222 IPR000608 -
Bach12g00613 231 SMART ubc_7 80 227 - -
Bach12g00613 231 Gene3D Ubiquitin Conjugating Enzyme 73 226 IPR016135 -
Bach12g00613 231 Pfam Ubiquitin-conjugating enzyme 81 221 IPR000608 -
Bach12g00613 231 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 76 208 - -
Bach12g00613 231 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 152 168 IPR023313 -
Bach12g00613 231 FunFam protein PEROXIN-4 isoform X1 75 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00613 Bach-Chr12 4167025 4171336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00613 81 197 Miscellaneous Gene Families AT3G17000 35.537 3.57e-16 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00613 K10689 - vvi:100254379 324.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00613 12 4167025 4171336 Bach12g00613 12 4167025 4171336 ECH