Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00591 ATGCCTAATTTACTGTGTTGCGTCCAGGTATTAATTTGTTCAAAAGTACAAGCAAGCTCAAAATTCCCTCATATCAATCGGGATTTTGCTGAACTCTACCGGATCGGCTTTTTTCGTTCGCATCGGAGACTTCGGTCGTCGCTCTACTTTGCTTATTTGCAGCTCATTACTCTTTTCCTCTCTTTTTTCGTTCAGGAGTTTATCCAAGCAGTAGACATGTCTTCATCATATCTTCCTGCAACAACAGAGTCACTTGCTCAGGCATTGGAAGCCAAAGATCCATCTGAGGCCATCTCCATTCTTTATCGTGTACTTGAAAACCCTTCTTCTTCTCCAGAAGCTCTGCGCATAAAAGAGCAAGCCATCACAAACCTTTCTGACCTTCTCAGGCAGCAGAACAGGGCAGAGGATCTACGCAGCCTTCTTACCCAATTGAGGTCCTTCTTTTCTTTGATCCCTAAGGCAAAGACTGCTAAAATTGTAAGGGGAATAATTGACTCTGTTGCTAAAATACCAGGGACATCAGATCTACAAATTGCTCTCTGCAAAGAAATGGTGCAATGGACTCGTGCTGAAAAGCGCACCTTTCTGAGGCAGCGAGTTGAGGCAAGGCTTGCAGCACTTCTGATGGAAAGTAAGGAGTATTCAGAAGCTTTGACTCTCCTTACTGGGTTAGTCAAAGAGGTTAGAAGGCTGGATGATAAGCTTCTTCTTGTAGACATAGACCTCCTTGAAAGCAAGCTACACTTCTCCTTAAGAAACCTTCCAAAGGCAAAAGCTGCCCTCACAGCTGCAAGAACAGCTGCAAATGCTATTTATGTGCCCCCAGCTCAACAAGGTGCCATAGATCTGCAGAGTGGGATTCTTCATGCAGAGGAAAAAGATTATAAAACTGCATATAGTTATTTTTTTGAAGCATTTGAGTCTTTCAATGCTCTTGAAGACCCCAAGGCTGTTTATAGCCTAAAGTATATGTTGTTGTGTAAAATCATGGTTAGTCAAGCTGATGATGTGGCTGGGATTATTTCTTCTAAAGCTGGCCTACAATATGTTGGGCCTGATTTGGATGCCATGAAAGCTGTTGCCGATGCTCATTCTAAGCGATCTCTCAAGTTATTTGAGACTGCATTGCGGGACTACAAAGCACAGTTAGAAGAAGACCCAATTGTACACAGGCACCTCTCGTCCCTTTATGACACCCTCCTTGAGCAGAATCTTTGCAGATTGATTGAGCCATTCTCAAGAGTTGAGATTGCACATATTGCTGAGTTAATTGAACTTCCCACTGATCATGTGGAGCGGAAGCTGTCTCAGATGATTTTGGACAAGAAGTTTGCAGGGACATTGGATCAAGGTGCTGGATGCCTCGTCATATTTGACGATCCCAAGACTGATGCAATCTACCCTGCAACTTTAGAGACCATTTCCAATATTGGGAAGGTCGTAGACAGTCTTTACGTTAGGTCAGCCAAGATAATGGCATAA 1485 0.4337 MPNLLCCVQVLICSKVQASSKFPHINRDFAELYRIGFFRSHRRLRSSLYFAYLQLITLFLSFFVQEFIQAVDMSSSYLPATTESLAQALEAKDPSEAISILYRVLENPSSSPEALRIKEQAITNLSDLLRQQNRAEDLRSLLTQLRSFFSLIPKAKTAKIVRGIIDSVAKIPGTSDLQIALCKEMVQWTRAEKRTFLRQRVEARLAALLMESKEYSEALTLLTGLVKEVRRLDDKLLLVDIDLLESKLHFSLRNLPKAKAALTAARTAANAIYVPPAQQGAIDLQSGILHAEEKDYKTAYSYFFEAFESFNALEDPKAVYSLKYMLLCKIMVSQADDVAGIISSKAGLQYVGPDLDAMKAVADAHSKRSLKLFETALRDYKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPFSRVEIAHIAELIELPTDHVERKLSQMILDKKFAGTLDQGAGCLVIFDDPKTDAIYPATLETISNIGKVVDSLYVRSAKIMA 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00591 494 Pfam 26S proteasome subunit RPN6 C-terminal helix domain 465 490 IPR040780 -
Bach12g00591 494 SMART PCI/PINT associated module 215 391 - -
Bach12g00591 494 Coils Coil 198 218 - -
Bach12g00591 494 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2 84 490 - -
Bach12g00591 494 SUPERFAMILY TPR-like 201 395 IPR011990 GO:0005515
Bach12g00591 494 Pfam PCI domain 357 458 IPR000717 -
Bach12g00591 494 SUPERFAMILY "Winged helix" DNA-binding domain 386 468 IPR036390 -
Bach12g00591 494 ProSiteProfiles PCI domain profile. 295 463 IPR000717 -
Bach12g00591 494 Gene3D - 118 493 - -
Bach12g00591 494 Coils Coil 118 138 - -
Bach12g00591 494 Pfam 26S proteasome regulatory subunit RPN6 N-terminal domain 86 200 IPR040773 -
Bach12g00591 494 FunFam 26S proteasome non-ATPase regulatory subunit 11 118 493 - -
Bach12g00591 494 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 392 475 IPR000717 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00591 Bach-Chr12 4020013 4023813 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00591 K03036 - qsa:O6P43_015555 752.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00591 12 4020013 4023813 Bach3g01849 3 26720304 26721572 BWGD