Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00566 ATGGTAATTCCCAAGCCTCTGTTACCTGTTGAGCATAATGAATCTGAGAAAGAAAGAAGCAAGAATGGTTGTGAGCCTTTGATTCCTGGGTTACCGAATGAAATCGCGGAGCACTGTCTTCTTCATCTACCGTACCCATATCAAGCTCTGGTACGCTCTGTTTCTTCTTCATGGAACAGAGTAATTACAGACCCCACCTTCCTGCTCTCAAGGAAATCGCTTTCACTCGCTTTGCCCTATCTCTTCGTGTTTGCCTTTCACAAACCAACGGCAAGGATTCAATGGCAAGCGCTGGACCCTCGATCAGGCCATTGGTTTGTACTACCGGACATGCCATCTCCCAAGGCAGTTTGTCCACCTGCTTTTGCATGCGCCTCGCTACCGCGTCAGGGGAAGCTCTTCGTCATGGGTGGTATGCGGTCCGACACAGAGACTTCCATGCAGACTACGATCATGTACCATACATCAACAAATCAATGGTCAATAGCGTCGTCAATGCCAACCGCGCGATCATTTTTCTCGGCAGGGAGTGTGAACGGGAAAATCGTAGCTGTTGGAGGAAGTCAGACCAATGCGAGTGACTCAGTCAGAGCAGTTGATGTCTACGATCCAGAAAAGGACACGTGGACCGGCGCTGCTAGGATAGACACCGGCCTGGTCCAATACGACTCAGCCGTGGTGGGAAACAAGATGTACGTGACGGAAGGCTGGACCTGGCCGTTCCACTTTTTTCCGAGGGGTGCGGTGTACGATGCAGATAGAGATAGGTGGCAGGAGATGAAGCAGGGGATGAGGGAAGGGTGGACGGGGTTGAGCGCGGTGGTGGGGCGCAGAGTATTTGTGGTATCAGAATACGGGGACTGTCCGTTGAAGGTGTACGATGAGGAGGATGACACGTGGCATTACGTAGGTGGCGACAGATTCCCAAGAGAGAAAATGCAAAGACCATTCGCTGTGAATGGAGCGGAAGGGAGAATCTATGTGGTGTCGTGTGGATTGAATGTGGCAATTGGGAGCGTAGTGTTTGAAGAAGACAAAGGAAAACAAGTTGTAAAACTAATGTGGGAGCTGGTAGAGGCACCAAAGGCATTCAGGGACCTCTCACCTTCTAATTGCCAGGTGTTATATGCTTGA 1134 0.5062 MVIPKPLLPVEHNESEKERSKNGCEPLIPGLPNEIAEHCLLHLPYPYQALVRSVSSSWNRVITDPTFLLSRKSLSLALPYLFVFAFHKPTARIQWQALDPRSGHWFVLPDMPSPKAVCPPAFACASLPRQGKLFVMGGMRSDTETSMQTTIMYHTSTNQWSIASSMPTARSFFSAGSVNGKIVAVGGSQTNASDSVRAVDVYDPEKDTWTGAARIDTGLVQYDSAVVGNKMYVTEGWTWPFHFFPRGAVYDADRDRWQEMKQGMREGWTGLSAVVGRRVFVVSEYGDCPLKVYDEEDDTWHYVGGDRFPREKMQRPFAVNGAEGRIYVVSCGLNVAIGSVVFEEDKGKQVVKLMWELVEAPKAFRDLSPSNCQVLYA 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00566 377 SUPERFAMILY F-box domain 26 96 IPR036047 GO:0005515
Bach12g00566 377 Pfam F-box domain 30 67 IPR001810 GO:0005515
Bach12g00566 377 Gene3D - 72 346 IPR015915 GO:0005515
Bach12g00566 377 SMART kelc_smart 132 180 IPR006652 GO:0005515
Bach12g00566 377 SMART kelc_smart 181 229 IPR006652 GO:0005515
Bach12g00566 377 SMART fbox_2 31 71 IPR001810 GO:0005515
Bach12g00566 377 SUPERFAMILY Kelch motif 80 332 IPR015915 GO:0005515
Bach12g00566 377 Pfam Kelch motif 130 167 IPR006652 GO:0005515
Bach12g00566 377 Pfam Kelch motif 169 211 IPR006652 GO:0005515
Bach12g00566 377 PANTHER OS02G0202900 PROTEIN 14 369 IPR045887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00566 Bach-Chr12 3874197 3875330 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00566 31 305 Miscellaneous Gene Families AT4G33900 21.262 2.94e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00566 - - pop:7458732 544.273