Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00549 ATGCCACTCGGAGAAAGGGCAGGGGATAAGAGCGAGTCTCGATATTGTGGTGTAGAGACGGAATTTAACGATGACATGCCTCACGTGCTGGCTTTCAATCTCGCTTCCGGGGGTTTCGACTTCATTGTTGCTCCTCTGATGGACCCTACTTATCGACCAAGCCTACTGCAAAAGGATAGTTTGGGATCTGGTGTTCTACCATTTGCTGGGTCAGACTTAGTCTTGAGCCCTGCTCAGTGGAGCAGTCATGTAGTGGGAAAAATTAGCTCATGGATAGATTTGGATTCGGAAGATGAAACTCTTAGGATGGATTCTGAAACCACTCTCAAACAAGAAATAGCTTGGGCTACTCATCTCTCTTTACAGGCTTGCCTACTTCCAGCTCCTAAAGGAACATCCATTGCTAACTACGCTAGATGTGTGAATCAAATCTTGCAGGGCCTCAGTAATATTCAGTTGTGGCTTAGGATTCCTTTGGTGAAGCCTGATGATGACTGTAAGGATGCAAAACCTGATACTTCGGTTGATTCTTGGGAGACGTGGAATTCATTTCGTCTTCTCTGTGAGCATCATAGTCAATTGTGCATTGCACTAGACATTTTGAGTACCTTACCATCAGCGAACTCACTTGGACGTTGGTTTGGAGAGTCTGTTAGAGCAGCTATCATAAATACTGATTCATTTTTAACTAATGCTCGTGGTTATCCATGCCTCTCAAAGCGTCACCAGAAGTTAGTGACTGGTTTTTTTAACCACTCCATGCAGATCATTATGTCTGGAAAACCAGTTCATAATATTCCCAAAGCAAGTGTGGATTCTGCTTTTTATCATAACCATTCTGTTGCAGATTCTCAAAAACATCCCTTGAGGCCGTATCTGGACTACGTTGCTTATCTATACCAAAGGATGGATCCTCTTCCTGAGCAAGAACGATTTGAGCGTGGTTACAGGGATTTCTTACAATCACCCTTGCAACCTCTCATGGATAATCTAGAGGCTCAGACCTATGAAACATTTGAGAAAGATGCAGTAAAATATATTCAGTACCAAAGAGCAGTTTCCAAAGCATTGCTGGACAGGGTTCCTGATGAAAAGGCATCTTCGGTTACCACTGTATTGATGGTTGTTGGTGCAGGGCGTGGACCACTTGTGCGAGCATCCTTACAGGCAGCTGAAGAAACTGGACGGAAGCTAAAAGTTTTTGCTGTGGAGAAGAATCCAAATGCAGTTGTTACACTTAATAGTTTGATTAAATTGGAGGGCTGGGAGGATCTTGTTACCATAGTCTCAAGTGACATGCGTTACTGGAATGCCCCTGAAAAGGCTGACATTTTGGTAAGTGAATTGCTAGGTTCTTTTGGTGACAATGAGTTGTCTCCTGAGTGCCTTGATGGAGCCCAGAGGTTTCTGAAGCAAGATGGAATTTCAATACCATCTTCGTATACAAGTTTCGTCCAACCAGTGACAGCATCGAAGTTATACAACGATGTTAAGGCACATAAAGATATTGTACACTTCGAAACTGCTTATGTTGTAAAAATACACAATGTAGCTAGGCTTGCACCAACTCAACCTGTTTTTACATTTACCCATCCAAAACATTCAAATACGGAAAGCAACCTGCGGTATAAGAAGTTGCAGTTTATGATACCTAATGACACTGGATCAACTATGGTGCATGGATTTGCTGGCTACTTTGATGCAACGCTTTACAAGGATGTACATCTTGGTACTGAACCTTCAACAGCTACCCCGAACATGTTCAGCTGGTTCGCGATATTTTTCCCATTAAGGACGCCTATTTGTGTGACTCCTGGTTCTATCCTGGAAGTACATTTCTGGCGCTGTTGCGCTCCTACAAAGGTTTGGTACGAGTGGTGTGTTTCATCTCCCTCTTCATCTCCCATTCACAACAGCAACGGACGCTCATACTGGGTTGGACTCTAGCAGGTTCTACTTACATAACGACATTTGAAAATTGAACATTGTGTAACTCGGTGCAAAGCAAATGCCCACATTTGGGGTTCACTGAGTTGTAGCTTAATTAGAGCTGACTACAAACTGATTCAGGAGGGTGCTCTTCGTTTTAGTAAATCCTGTTGTACCATAAGATGTAATTATAATTTTTTTTAACATTTATCTTCAAAATCTTGGTGGAAG 2160 0.4264 MPLGERAGDKSESRYCGVETEFNDDMPHVLAFNLASGGFDFIVAPLMDPTYRPSLLQKDSLGSGVLPFAGSDLVLSPAQWSSHVVGKISSWIDLDSEDETLRMDSETTLKQEIAWATHLSLQACLLPAPKGTSIANYARCVNQILQGLSNIQLWLRIPLVKPDDDCKDAKPDTSVDSWETWNSFRLLCEHHSQLCIALDILSTLPSANSLGRWFGESVRAAIINTDSFLTNARGYPCLSKRHQKLVTGFFNHSMQIIMSGKPVHNIPKASVDSAFYHNHSVADSQKHPLRPYLDYVAYLYQRMDPLPEQERFERGYRDFLQSPLQPLMDNLEAQTYETFEKDAVKYIQYQRAVSKALLDRVPDEKASSVTTVLMVVGAGRGPLVRASLQAAEETGRKLKVFAVEKNPNAVVTLNSLIKLEGWEDLVTIVSSDMRYWNAPEKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIPSSYTSFVQPVTASKLYNDVKAHKDIVHFETAYVVKIHNVARLAPTQPVFTFTHPKHSNTESNLRYKKLQFMIPNDTGSTMVHGFAGYFDATLYKDVHLGTEPSTATPNMFSWFAIFFPLRTPICVTPGSILEVHFWRCCAPTKVWYEWCVSSPSSSPIHNSNGRSYWVGL 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00549 648 Gene3D Vaccinia Virus protein VP39 312 479 IPR029063 -
Bach12g00549 648 Pfam PRMT5 oligomerisation domain 480 646 IPR035248 -
Bach12g00549 648 Pfam PRMT5 TIM barrel domain 38 302 IPR035247 -
Bach12g00549 648 PIRSF PRMT5 3 648 IPR007857 GO:0006479|GO:0008168|GO:0035246
Bach12g00549 648 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 320 626 IPR025799 GO:0016274|GO:0018216
Bach12g00549 648 FunFam Protein arginine N-methyltransferase 14 309 - -
Bach12g00549 648 Gene3D - 14 309 - -
Bach12g00549 648 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 335 647 IPR029063 -
Bach12g00549 648 Gene3D - 480 648 - -
Bach12g00549 648 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 5 7 648 IPR025799 GO:0016274|GO:0018216
Bach12g00549 648 FunFam Protein arginine N-methyltransferase 5 312 479 - -
Bach12g00549 648 FunFam Protein arginine N-methyltransferase 5 480 648 - -
Bach12g00549 648 Pfam PRMT5 arginine-N-methyltransferase 308 477 IPR035075 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00549 Bach-Chr12 3743209 3752261 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00549 K02516 - gmx:100782245 1148.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00549 12 3743209 3752261 Bach12g00549 12 3743209 3752261 ECH