Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00547 ATGGAAGGTGTGAGATTTAGGGGGCTTCTTGTTCCTTTGTTAATCATTGTGCTGTTAGCGGGTTCTGTCAACGGGATTGGTGTAAATTGGGGCACACAGTCAACGCACCCTTTGCCAACGTCGACGGTGGTGAAAATGCTTAAAGACAATGGTATTCAGAAGGTTAAGCTTTTTGATGCCGATACCAGTATTCTAGATGCTCTGAAGAAATCTGGGATCCAAGTGATGGTAGGTATTCCAAATGATATGCTGTATACACTGGCTAATAGCGTGCAAGCAGCTGAAAAATGGGTTTCCAAGAATGTATCCGCGCACGTCTCTTCCGGCGGAGTAGACATCAGGTATGTTGCAGTGGGGAATGAACCTTTCTTGTCAACATACAATGGCACCTTTGAAGCCACGACTCTTCCAGCCATGCAAAATATCCAGTCAGCTCTGATAAAATCTGGTTTGAGCAATCAGGTCAAAGTCACTGTCCCTTTAAATGCTGATGTATACGAGAGTTCATCAGATAAACCTTCCGACGGCAACTTCCGGTCAGATATCCATGACCTCATGGTGCAGATTGTCAAGTTCTTGAGTGACAATGGCGCTCCATTTACTGTCAACATCTATCCTTTCATCAGCCTCTACAACGATCCCAGTTTCCCTGTTGACTATGCCTTCTTCAATGGCTATCAGACTCCAATAAATGACAATGGAAGGGAATACGACAATGTGTTTGATGCCAACCATGATACCCTTGTATGGGCATTGCAGAAGAATGGGTATGGAAACTTGCCTATAATTGTGGGAGAAATTGGGTGGCCTACTGATGGGGACAGAAATGCAAACAACCAGTATGCCCAGCGTTTTAACCAAGGCTTCATGTCTCGCTATATTGCCGGAAAAGGAACCCCAATGAGGCCTGGTCCAATGGATGCCTACTTGTTTAGTCTCATAGATGAAGACAATAAAAGCATTCAGCCAGGTAATTTTGAACGTCACTGGGGGATGTTTTACTATGATGGTTCACCCAAATACCAACTTAACCTAGGGACAAGATCCAATGCCAATGGCTTAGTGGGTGCCTCTGGTATCCATTATCTGGCCAAGAAGTGGTGTATTTTGAAATCATCAGCAAACCTCAATGATGATCAAGTGGCACCAAGTGTGGCTTTTGCATGCCAAAATGCTGATTGCACCAGTCTTGGCTATGGGACCTCATGTGGTACTTTAGACATTCGTGGTAATATCTCTTATGCATTCAACAGCTACTTCCAGATAAATGACCAGATTGACAGTGCCTGCAAATTCCCTGGTCTTTCTGTTGTTACTGATAAAGATCCTTCAATGGGAGACTGCAAATTCAAAATCATGATCCAGACGGATTCGGCGCAGCTTAGAAAGCCAGTTCGCTTAATGCTCTTTGCATTTTTGTTTGTTATTCTGTAA 1434 0.4386 MEGVRFRGLLVPLLIIVLLAGSVNGIGVNWGTQSTHPLPTSTVVKMLKDNGIQKVKLFDADTSILDALKKSGIQVMVGIPNDMLYTLANSVQAAEKWVSKNVSAHVSSGGVDIRYVAVGNEPFLSTYNGTFEATTLPAMQNIQSALIKSGLSNQVKVTVPLNADVYESSSDKPSDGNFRSDIHDLMVQIVKFLSDNGAPFTVNIYPFISLYNDPSFPVDYAFFNGYQTPINDNGREYDNVFDANHDTLVWALQKNGYGNLPIIVGEIGWPTDGDRNANNQYAQRFNQGFMSRYIAGKGTPMRPGPMDAYLFSLIDEDNKSIQPGNFERHWGMFYYDGSPKYQLNLGTRSNANGLVGASGIHYLAKKWCILKSSANLNDDQVAPSVAFACQNADCTSLGYGTSCGTLDIRGNISYAFNSYFQINDQIDSACKFPGLSVVTDKDPSMGDCKFKIMIQTDSAQLRKPVRLMLFAFLFVIL 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00547 477 Pfam Glycosyl hydrolases family 17 26 344 IPR000490 GO:0004553|GO:0005975
Bach12g00547 477 Gene3D Glycosidases 24 352 - -
Bach12g00547 477 ProSitePatterns Glycosyl hydrolases family 17 signature. 260 273 IPR000490 GO:0004553|GO:0005975
Bach12g00547 477 FunFam Glucan endo-1,3-beta-glucosidase 5 25 351 - -
Bach12g00547 477 Gene3D - 363 460 - -
Bach12g00547 477 SUPERFAMILY (Trans)glycosidases 26 344 IPR017853 -
Bach12g00547 477 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 18 439 IPR044965 GO:0004553|GO:0005975
Bach12g00547 477 SMART X8_cls 366 450 IPR012946 -
Bach12g00547 477 Pfam X8 domain 366 435 IPR012946 -
Bach12g00547 477 FunFam Glucan endo-1,3-beta-glucosidase 8 362 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00547 Bach-Chr12 3734159 3736794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00547 6 459 Glycoside Hydrolase AT4G31140 70.961 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00547 K19893 - gmx:100796552 808.135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00547 12 3734159 3736794 Bach3g01894 3 27032427 27035328 BWGD