Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00535 ATGCTTAAGCAAATTCTGAGCAGGCTTCCTCGGAAGTCATCGAAATCTGACTCGGACGAGTCATGCCGGGGCGACTCTTTACGGTCCAACTCCTCACGGGTCGGTTCACCTCGCGTCGCCAGTAGGAGTGACCGGTCACAAGGTGGGAGTTCATCTTCAAGTCGATCTAACAATGCGAAGCGTACTTCTTCATCGGCGGTTTTTCCAGCGAGCATCGTGTCAGGGATCGAACCCTTGGTGCCATTTAAAGACGTGCCTAATTCAGAGAAGATGAATCTATTTGTTAGCAAGTTGAGCCTTTGTTGTGTTACATTTGATTTTACTGACCCCGGTAAGGATACCGTGGAGAAAGATATCAAAAGGCAAACTTTACTGGAACTTGTCGATTTTGTGGAGTCTGGGTCGATGAAATTCAGTGACCCTGCTATTCATGCTATGTGCAAAATGTGTGCTATTAATCTCTTCAGAGTTTTCCCGCCTAATTATCGGTCTAACGGGGGTGGTGCTAGTGGTGAGAATGATGATGATGAACCAGTATTTGATCCTGCTTGGCCACATTTACAGATTGTGTATGATTTGCTGCTTAAATTTATTACTTCTTCATGCCATGATGCTAAGTTAGCGAAGAAGTATTTTGACCATTCATTTATTTCGAAATTGCTTGGCTTGTTTGATTCAGAGGATCCAAGAGAAAGAGACTGCTTGAAGACAATTCTGCATAGGGTTTATGGGAAGTTCATGGTGCATAGGCCCTACATTCGAAAATCCTTAAACAATTTGTTTCATCGGTTTGTAATGGAGACTGAGAGACACAATGGAATTGCAGAGTTATTGGAGATTTTTGGGAGTATAATTAGTGGGTTTGCTTTACCTTTGAAAGAGGAACACAAAATCTTCTTGTGGAGAGTTCTAATCCCCTTGCACAAGCCAAAATATATGGGGATTTATTTTCAGCAATTGACGTACTGTGTTACTCAATTTATAGAGAAGGAACCGAAGTTGGCAAGCACTGTGATAAGGGGTTTGTTAAAATATTGGCCAATAACAAATAGTCAGAAAGAGATGATGTTCCTGGGTGAAGTGGAAGAGATATTGGAAGCAATCAACATGGTAGAGTTCCAGAGGGTCATGGTTCCATTGTTTTGGCGGATTGGGTGCTGCATTAACAGTTTACACTTCCAGGTAGCTGAAAGGGCCCTTTTCTTATGGAACAATGACCATATTGTCAACTTGATTGCGCATAATCGTCAAGTGATCCTGCCCATCATATTTCCAGCTTTAGAGAAGAACTCTCAGAGCCACTGGAACCAGTCAGTGCTTAACTTAACTCTTAATGTTAAAAAAATGTTTATGGAGATGGATGAGAAGCTCTATCTGTCGTGTCATGCTCACTACGAGGAGGAAGAAGCACTTCTAAGCTCAGCTGCTGAGAAGCGGAAGCAAGCGTGGGAACGACTAGAGCAGGTAGCCAGTCGCGAGCCTGTAATTGGAAATACTGCCGTTTTAGTGTCCTTTTGA 1518 0.4289 MLKQILSRLPRKSSKSDSDESCRGDSLRSNSSRVGSPRVASRSDRSQGGSSSSSRSNNAKRTSSSAVFPASIVSGIEPLVPFKDVPNSEKMNLFVSKLSLCCVTFDFTDPGKDTVEKDIKRQTLLELVDFVESGSMKFSDPAIHAMCKMCAINLFRVFPPNYRSNGGGASGENDDDEPVFDPAWPHLQIVYDLLLKFITSSCHDAKLAKKYFDHSFISKLLGLFDSEDPRERDCLKTILHRVYGKFMVHRPYIRKSLNNLFHRFVMETERHNGIAELLEIFGSIISGFALPLKEEHKIFLWRVLIPLHKPKYMGIYFQQLTYCVTQFIEKEPKLASTVIRGLLKYWPITNSQKEMMFLGEVEEILEAINMVEFQRVMVPLFWRIGCCINSLHFQVAERALFLWNNDHIVNLIAHNRQVILPIIFPALEKNSQSHWNQSVLNLTLNVKKMFMEMDEKLYLSCHAHYEEEEALLSSAAEKRKQAWERLEQVASREPVIGNTAVLVSF 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00535 505 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 492 IPR002554 GO:0000159|GO:0007165|GO:0019888
Bach12g00535 505 MobiDBLite consensus disorder prediction 27 62 - -
Bach12g00535 505 FunFam Serine/threonine protein phosphatase 2A regulatory subunit 86 489 - -
Bach12g00535 505 Gene3D - 86 489 IPR011989 -
Bach12g00535 505 SUPERFAMILY ARM repeat 92 483 IPR016024 -
Bach12g00535 505 MobiDBLite consensus disorder prediction 10 26 - -
Bach12g00535 505 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 81 490 IPR002554 GO:0000159|GO:0007165|GO:0019888
Bach12g00535 505 MobiDBLite consensus disorder prediction 1 62 - -
Bach12g00535 505 PIRSF PP2A_B56 3 502 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00535 Bach-Chr12 3630757 3633584 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00535 K11584 - qsa:O6P43_019396 846.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach3g01910 3 27181432 27183508 Bach12g00535 12 3630757 3633584 BWGD
Bach12g00535 12 3630757 3633584 Bach12g00535 12 3630757 3633584 ECH