Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00456 ATGGCGACCCAAAGAGCTTCGAAGCTAACCAAATCCGCTTTAACGGGCATTAGTGGGTGTAGGAGCTTTCACAAGTCTCTCTATCAACCTCGCTCTGCATCGTCTCGCGTCGGTCCATTGTCCGACTTCACTTGTAATTGGAGAAATGCTGTAAAGTTCTTGGTTCTGCCTCAAATATTCAACACAGTTGCAGAGAGCAGCATCACCTCCGCCAAGTTTCTCTCATACTCTTTCACTCGCAAATTCCATGCCTCCAATCCATCTTATCGCTCAGCAAGCAGTTCTCAGATTGCTCAGACAGAATTTACAGAAATGGCATGGGAGGGCATTATTGGTGCTGTTGATGCTGCACGGATTAGCAAACAACAAGTTGTGGAGTCTGAGCACTTAATGAAAGCCCTCTTGGAGCAAAAGGATGGTCTGGCTCGAAGAATATTTGCCAAGGCAGGATTAGATAACACAACTGTTCTGCAGGCCACTGATGAATTTATATCCCAGCAACCAACGGTGACTGGTGACACAAGTGGCCCTACCATAGGCACACATCTGAGTTCCCTCTTGGATAATGCCCGAAAGCACAAGAAAGAAAAGGGAGATGAATACGTGTCTGTGGAGCATTTTTTATTGGCGTTCCATTCAGACAAGAGGTTTGGGCAGCAGCTATTTAAGAAACTTCAACTTGGCGAGAAGGATTTGAAGGATGCCATCCAAGCTGTTCGTGGAAGTCAAAGAGTGACTGATCAAAATCCCGAGGGAAAATATGAGGCACTGGATAAGTATGGAAATGATCTGACTGAGCTAGCAAGGCGTGGCAAGCTTGATCCTGTCATAGGTCGAGATGATGAAATTCGGCGCTGTATCCAGATACTGTCGAGGAGAACAAAAAATAATCCTGTTATTATTGGCGAGCCTGGTGTGGGGAAAACTGCAATTGCTGAAGGATTAGCTCAACGGATAGTGCGTGGAGATGTTCCAGAACCATTGTTGAACAGGAAGTTGATCTCCCTAGATATGGGTTCATTGGTTGCTGGTGCTAAGTTTCGTGGAGACTTTGAGGAAAGGTTGAAAGCCGTCCTGAAGGAAGTTACAGCTTCAAATGGGCAAATAATTTTGTTTATTGACGAGATTCATACTGTTGTAGGTGCAGGAGCTACAACTGGTGCAATGGATGCCGGGAACTTGTTGAAGCCAATGCTTGGACGAGGTGAGCTTCGATGTATAGGAGCAACTACATTGAACGAGTATAGAAAATACATTGAGAAGGATCCTGCACTTGAGCGTAGATTCCAACAAGTGTTTTGTGGCCAGCCATCTGTTGAAGACACAATATCCATTCTTCGTGGGTTGCGTGAGCGGTATGAGTTGCATCATGGAGTCAAGATATCAGACAGTGCACTTGTTTCGGCTGCTGTGCTTGCAGATCGATATATTACAGAACGTTTCCTCCCTGACAAAGCTATTGATCTTGTGGATGAAGCCGCTGCAAAGCTGAAGATGGAGATTACTTCTAAGCCAACAGAATTGGATGAGATAGACAGAGCAGTCCTGAAGTTGGAGATGGAGAAATTATCTCTGAAAAATGACACTGATAAGGCATCCAAAGAAAGATTAAATAAGCTTGAAAGTGATTTGAATTTGCTTAAACAGAAGCAGAAAGAATTAACAGAACAATGGGAACGTGAAAAGGTTCTAATGACTCGGATAAGATCAATCAAGGAAGAGATTGATAGAGTTAACCTGGAGATGGAAGCTGCTGAGCGAGAGTATGACCTGAACCGTGCTGCTGAGCTCAAGTATGGAACTCTAATTTCCCTTCAGCGCAAACTGGAAGAAGCTGAAAAGAACCTAGCTGACTTCCAAAACTCTGGACAATCTTTGCTTCGAGAAGAGGTCACTGATCTTGATATTGCTGAGATTGTAAGCAAATGGACTGGTATACCATTATCAAACCTGCAACAAACAGAGAGAGAAAAGTTGGTGCTGCTGGAACAGGTTCTTCATAAGAGGGTGGTTGGTCAGGATAATGCCGTAAAATCTGTTGCTGATGCAATCCGACGTTCAAGGGCAGGATTGTCTGACCCGAATAGGCCAATAGCAAGCTTCATGTTCATGGGTCCAACTGGTGTTGGAAAAACTGAGCTTGCCAAGGCTTTGGCCGGCTACATGTTTAACACAGAAAATGCCCTTGTTAGAATCGATATGAGTGAGTACATGGAGAAACATGCAGTTTCACGATTGGTTGGGGCCCCACCTGGTTATGTAGGTTATGAAGAAGGGGGTCAGCTAACTGAAGTGGTCCGTAGAAGACCTTACTCAGTGGTACTTTTTGATGAAGTAGAGAAGGCACATCATGATGTCTTCAACATCTTGTTACAGTTGTTGGATGATGGAAGGATTACTGACTCTCAAGGAAGGACTGTTAGCTTCACAAATTGTGTGGTCATAATGACTTCGAACATTGGGTCCCATTACATACTAGAAACTCTACGTAATACACATGATGACAAAGATGCAGTTTATAATCAGATGAAAAGGCAAGTTGTTGAGTTGGCTAGGCAAACATTTCGCCCTGAGTTCATGAACCGAATTGATGAATATATTGTTTTCCAGCCATTGGATTCCAAAGAGATCAGCAAAATTGTGGAGCTCCAGATGGAACGGGTGAAGGCCAGGCTCAAGCAGAAAAAAGTTGATCTTCATTACACAAAAGAAGCTGTTGAACTTCTGGGAATTTTGGGCTTTGATCCAAATTTTGGTGCAAGACCAGTTAAAAGGGTAATACAACAATTGGTTGAGAATGAAATTGCCATGGGAATTCTAAGAGGAGATTTCAAAGAAGAAGATTCAATTGTTGTGGATGCCGATCTTACTGGGTCAGCCAAGGACCTTCCGTCCCAAAAGAGACTAGTAATCAAGAAGTTGGAGAGTCCTGTTGCGGATGCCATGGTTGCAAATGACTAG 2961 0.4377 MATQRASKLTKSALTGISGCRSFHKSLYQPRSASSRVGPLSDFTCNWRNAVKFLVLPQIFNTVAESSITSAKFLSYSFTRKFHASNPSYRSASSSQIAQTEFTEMAWEGIIGAVDAARISKQQVVESEHLMKALLEQKDGLARRIFAKAGLDNTTVLQATDEFISQQPTVTGDTSGPTIGTHLSSLLDNARKHKKEKGDEYVSVEHFLLAFHSDKRFGQQLFKKLQLGEKDLKDAIQAVRGSQRVTDQNPEGKYEALDKYGNDLTELARRGKLDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPEPLLNRKLISLDMGSLVAGAKFRGDFEERLKAVLKEVTASNGQIILFIDEIHTVVGAGATTGAMDAGNLLKPMLGRGELRCIGATTLNEYRKYIEKDPALERRFQQVFCGQPSVEDTISILRGLRERYELHHGVKISDSALVSAAVLADRYITERFLPDKAIDLVDEAAAKLKMEITSKPTELDEIDRAVLKLEMEKLSLKNDTDKASKERLNKLESDLNLLKQKQKELTEQWEREKVLMTRIRSIKEEIDRVNLEMEAAEREYDLNRAAELKYGTLISLQRKLEEAEKNLADFQNSGQSLLREEVTDLDIAEIVSKWTGIPLSNLQQTEREKLVLLEQVLHKRVVGQDNAVKSVADAIRRSRAGLSDPNRPIASFMFMGPTGVGKTELAKALAGYMFNTENALVRIDMSEYMEKHAVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEVEKAHHDVFNILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLRNTHDDKDAVYNQMKRQVVELARQTFRPEFMNRIDEYIVFQPLDSKEISKIVELQMERVKARLKQKKVDLHYTKEAVELLGILGFDPNFGARPVKRVIQQLVENEIAMGILRGDFKEEDSIVVDADLTGSAKDLPSQKRLVIKKLESPVADAMVAND 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00456 986 Pfam C-terminal, D2-small domain, of ClpB protein 872 952 IPR019489 -
Bach12g00456 986 ProSiteProfiles Clp repeat (R) domain profile. 97 242 IPR004176 -
Bach12g00456 986 Coils Coil 568 595 - -
Bach12g00456 986 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 701 719 IPR001270 GO:0005524
Bach12g00456 986 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 808 822 IPR001270 GO:0005524
Bach12g00456 986 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 746 764 IPR001270 GO:0005524
Bach12g00456 986 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 775 793 IPR001270 GO:0005524
Bach12g00456 986 Gene3D - 439 644 IPR027417 -
Bach12g00456 986 SMART AAA_5 294 438 IPR003593 GO:0016887
Bach12g00456 986 SMART AAA_5 697 844 IPR003593 GO:0016887
Bach12g00456 986 Pfam AAA domain (Cdc48 subfamily) 696 865 IPR003959 GO:0005524|GO:0016887
Bach12g00456 986 FunFam ATP-dependent Clp protease subunit 650 870 - -
Bach12g00456 986 Gene3D - 872 968 - -
Bach12g00456 986 ProSitePatterns Chaperonins clpA/B signature 2. 731 749 IPR028299 -
Bach12g00456 986 PANTHER ATP-DEPENDENT CLP PROTEASE 103 976 - -
Bach12g00456 986 SUPERFAMILY Double Clp-N motif 101 252 IPR036628 -
Bach12g00456 986 Coils Coil 530 557 - -
Bach12g00456 986 Coils Coil 602 629 - -
Bach12g00456 986 ProSitePatterns Chaperonins clpA/B signature 1. 390 402 IPR018368 GO:0005524
Bach12g00456 986 CDD AAA 277 437 - -
Bach12g00456 986 CDD RecA-like_ClpB_Hsp104-like 658 869 - -
Bach12g00456 986 Pfam AAA lid domain 438 540 IPR041546 -
Bach12g00456 986 Pfam Clp amino terminal domain, pathogenicity island component 113 164 IPR004176 -
Bach12g00456 986 Pfam Clp amino terminal domain, pathogenicity island component 190 241 IPR004176 -
Bach12g00456 986 FunFam ATP-dependent chaperone ClpB 439 644 - -
Bach12g00456 986 Pfam ATPase family associated with various cellular activities (AAA) 300 432 IPR003959 GO:0005524|GO:0016887
Bach12g00456 986 FunFam Chaperone protein ClpB3, chloroplastic 98 244 - -
Bach12g00456 986 Gene3D - 649 870 IPR027417 -
Bach12g00456 986 FunFam ATP-dependent chaperone ClpB 872 961 - -
Bach12g00456 986 FunFam Chaperone clpB 1, putative 245 438 - -
Bach12g00456 986 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 646 952 IPR027417 -
Bach12g00456 986 Gene3D - 99 244 IPR036628 -
Bach12g00456 986 Gene3D - 245 438 IPR027417 -
Bach12g00456 986 NCBIfam ATP-dependent chaperone ClpB 102 955 IPR017730 GO:0005737|GO:0009408|GO:0042026
Bach12g00456 986 Coils Coil 508 528 - -
Bach12g00456 986 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 255 645 IPR027417 -
Bach12g00456 986 SMART ClpB_D2_small_2 872 958 IPR019489 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00456 Bach-Chr12 3095958 3102498 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00456 K03695 - qsa:O6P43_015753 1646.71