Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00445 ATGGGGAAAATGGTTGAAGACATTGGTACCAGTAAGGGTGGCAAGTATTCAAACGGGTTCGACTTGGATTTGGAAGACGACGACGACGACTTGACAAGCTTGCATGACTTGGGGGAGAAGAGTCTTAGAAATTTCTGTAGCAAGGCCTCCATGTTGTTCTTCGAAGAGTACGGGCTCATCAGTCATCAAATAAACTCGTACAATGATTTTATCCACAATGGTTTGCAAAGTGTGTTTGATTCATTTGGTGAGTTGATTGTTGAGCCAGGATATGATCCCTCAAAGAAGGGAGAGACCGGATGGAAATACGCTTCGGTGAGGTTTGGGAAGGTCACCCTTGATCGACCCAAGTTTTGGAGTGGTGAAGGAAATGTGACCGAGTTGAAAATGCTTCCCAGGCACGCCCGACTCCAGAAGATGACATATGCATCAAAGATGAAAGTGAATGTTCATGTTCAGGTATATACCCAAGGATTGGTTAGTAGCGACAAGTTTAAAACTGGCAAAGAACAATTCGTTCAGAAGGATATTATCAAGGAAGATAGCAGAGAAATCATCATAGGAAGACTCCCTGTCATGGTGAAGTCTAATCTATGTTGGATGAAAGAAGCTGAAAAAGATGATTGTGATTTTGATCATGGAGGTTACTTTCTGATCAAAGGTGCTGAGAAGACTTTTATTGCACAAGAGCAAATCTATTTGAAGAGGCTTTGGATTTCAAATATTCAATGTTTGACAGTTGCATACAAGTCGCAGGTGAAGAGAAATAGGTTAGTTATCAAGCTGGTGGGGAATCCCAGAATTGGTGATATTCAAGGAGGAGAGAAGGTCCTTACGGTATACTTTCTGTCAGTTGAGATTCCTGTATGGATACTTTTTTTTGCGCTCGGTGTCTCATCTGACAAAGAAGTTATAGATCTTATTGATTACCGCAATGATGATATCAAAGTTTCAAATGTACTCTTTGCATCCATTTGTGATGCTGATGCTGATGAGCGATTTAAAGATTTCCGTAAAGGAAAGGAAGCACTTAATTACATAGATGCAGAGGTAAAAAGAACCAGCTTTCCACCTACAGAATCTGGTGAAGACTGCCTTAACATGTATCTCTTTCCCAGCATTAGAGGCTTGAAGAGAAAGGCACGCTTCCTTGCATATATGATGAAGTGTCTCTTATTGGCCTATACTGGCCGCAGAAGGTGTGATAACAGGGATGATTTTAGAAACAAGAGGCTTGACTTGGCTGGTGAATTGCTTGAGCGTGAGCTCAGAGTACATATTGCACATGCTCGGAAACGTATGGCAAAAGCTATCCAGAGAGACCTTTATGGCGATCGTGATGTTCGTCCAATTGAGCACTATCTTGATGCTTCCATTATTACTAATGGTCTTCAAAGAGCATTCTCAACTGGAGCATGGACACATCATTTTAAAAAGATGGAAAGGATTTCTGGTGTGGTAGCAAATCTTGGTCGAACAAATCCATTGCAAACTATGGTTGATTTGAGAAGAACTCGCCAGCAGGTTCAGTACACAGGAAGGGTTGGAGATGCCAGATTCCCGCATCCTTCTCACTGGGGTAAGGTGTGTTTTCTCTCTACGCCAGATGGTGAAAATTGTGGACTTGTGAAAAATTTGGCTGTTACAGGACTTGTAAGTACAACAATATATGAATCCATAGTTCCTCACTTGTTTGATTGTGAAATGGAAGAGCTGGTGGATGACACTTCAACTAATCTGGGTGGAAAGGACAAAGTCTTCCTAAATGGGGATTGGGTTGGAGTCTGTGCAGATTCTTTTTCATTTGTGGCAGACCTAAGAAATAAACGTCGTAGAAATGAATTGCCCCATCAGGTGGAAATCAAAAGAGATCAACAGCAACAAGAAGTGCGCATATATTCTGATGCTGGAAGGATTCTGCGCCCTCTTTTAGTAGTCGATAATCTAAGAAAGATTAAATCTAAATGGGAAAGTTACTCTTTCCAGTCACTTCTGAACCATGGAGTTATTGAGCTTATTGGACCTGAAGAAGAAGAAGACTGCCGTACTGCATGGGGTGTTAAATATTTATTTGGGAAAGAGGGTAAATCTCCTGTAAAGTACACACATTGTGAACTTGATATGTCATTTCTACTGGGTTTAAGCTGTGCAATTGTACCATTTGCTAATCATGACCATGCTAGGAGGGTTCTGTACCAGTCACAGAAGCACTCTTCCCAGGCTATTGGTTTTCCTACAACCAATCCAAACATTAGAGTTGATACCTTGTCCCATCAGTTACACTATCCCCAAAAACCCCTTTTCTGTACCATGACTTCTGATTGTCTTGGGAAACCAATAGGTCACAATAAAGTGCTTCCAAAGCCTGAATTCTTTAATGGTCAGAATGCAATAGTGGCTGTCAATGTACATCTGGGATACAACCAAGAAGATTCCTTGGTGATGAACCGAGCTTCTTTGCAGCGTGGTATGTTCAGATCTGAGCACGTGAGAAGTTACAAAGCTGATATTGACAATAAGGAATCATCAGAGAAGCGAAGGAAGCCTGATGACATTATAAATTTCGGAAAGATACAAAGTAAAATTGGTCGAGTTGACAGCCTTGATGATGATGGCTTCCCATATGTTGGTGCAAACTTGCAGAGTGGTGATATTATTATTGGGCGATGTTCTGATTCGGGTGTTGATCATAGTGTAAAGCTAAAACACACTGAAAAGGGCTATGTTCAGAAAGTTGTACTGTCCTCAAATGATGAGGGGAAGAATTTTGCCGTAGTTTCTTTAAGACAGGTACGGAGTCCAGTCCTTGGAGACAAATTCTCAAGCATGCACGGACAGAAGGGTGTCTTAGGATTTCTTGAGGCTCAGGAGAACTTCCCCTTTACTAAAGAAGGAATAGTACCTGATATTGTGATAAATCCACATGCATTTCCCTCACGACAAACTCCTGGGCAACTCCTAGAAGCAGCATTAGGGAAGGGGATTGCTCTTGGTGGTGAATTGAGGCATGCCACCCCTTTCTCCACTCCTTCTGTTGAAGCCATCACAGAACAGCTTCACAGGGCTGGTTTTTCAAGATGGGGAAATGAGAGAGTATACAACGGGAGAACTGGTGAGATGGTCCGTTCGCTTATTTTTATGGGCCCAACATTCTACCAGCGTCTGCACCACATGTCTGAGGACAAAGTGAAGTTTCGGAACACTGGTCCAGTTCATCCGTTAACCCGACAACCCGTGGCAGATAGGAAGCGTTTTGGTGGGATCAAGTTTGGTGAAATGGAGCGTGATTGCCTCATAGCCCATGGCGCATCAGCAAATCTGCATGAACGCCTCTTTACACTTAGTGACTGCTCACAGATACACATATGCCGCAGCTGCAAGAATGTTGCAAATGTGATCTTGCGCCCAGTGTCTGGTGGCCAGAGGATAAGGGGACCTTACTGCCGCTTCTGTGAATCTGCCGAACACATTGTCAAGGCCAATGTACCCTATGGAGCTAAATTGCTATGCCAGGAGCTTTTCAGCATGGGCATCAGTCTCAAATTTGAAACCGAGCTGTGCTAG 3564 0.4285 MGKMVEDIGTSKGGKYSNGFDLDLEDDDDDLTSLHDLGEKSLRNFCSKASMLFFEEYGLISHQINSYNDFIHNGLQSVFDSFGELIVEPGYDPSKKGETGWKYASVRFGKVTLDRPKFWSGEGNVTELKMLPRHARLQKMTYASKMKVNVHVQVYTQGLVSSDKFKTGKEQFVQKDIIKEDSREIIIGRLPVMVKSNLCWMKEAEKDDCDFDHGGYFLIKGAEKTFIAQEQIYLKRLWISNIQCLTVAYKSQVKRNRLVIKLVGNPRIGDIQGGEKVLTVYFLSVEIPVWILFFALGVSSDKEVIDLIDYRNDDIKVSNVLFASICDADADERFKDFRKGKEALNYIDAEVKRTSFPPTESGEDCLNMYLFPSIRGLKRKARFLAYMMKCLLLAYTGRRRCDNRDDFRNKRLDLAGELLERELRVHIAHARKRMAKAIQRDLYGDRDVRPIEHYLDASIITNGLQRAFSTGAWTHHFKKMERISGVVANLGRTNPLQTMVDLRRTRQQVQYTGRVGDARFPHPSHWGKVCFLSTPDGENCGLVKNLAVTGLVSTTIYESIVPHLFDCEMEELVDDTSTNLGGKDKVFLNGDWVGVCADSFSFVADLRNKRRRNELPHQVEIKRDQQQQEVRIYSDAGRILRPLLVVDNLRKIKSKWESYSFQSLLNHGVIELIGPEEEEDCRTAWGVKYLFGKEGKSPVKYTHCELDMSFLLGLSCAIVPFANHDHARRVLYQSQKHSSQAIGFPTTNPNIRVDTLSHQLHYPQKPLFCTMTSDCLGKPIGHNKVLPKPEFFNGQNAIVAVNVHLGYNQEDSLVMNRASLQRGMFRSEHVRSYKADIDNKESSEKRRKPDDIINFGKIQSKIGRVDSLDDDGFPYVGANLQSGDIIIGRCSDSGVDHSVKLKHTEKGYVQKVVLSSNDEGKNFAVVSLRQVRSPVLGDKFSSMHGQKGVLGFLEAQENFPFTKEGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALGGELRHATPFSTPSVEAITEQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLHHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDCSQIHICRSCKNVANVILRPVSGGQRIRGPYCRFCESAEHIVKANVPYGAKLLCQELFSMGISLKFETELC 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00445 1187 Pfam RNA polymerase Rpb2, domain 2 277 413 IPR007642 GO:0003677|GO:0003899|GO:0006351
Bach12g00445 1187 Gene3D - 717 1070 IPR037033 GO:0003677|GO:0003899|GO:0006351
Bach12g00445 1187 Gene3D - 52 233 - -
Bach12g00445 1187 Gene3D - 402 573 - -
Bach12g00445 1187 SUPERFAMILY beta and beta-prime subunits of DNA dependent RNA-polymerase 47 1185 - -
Bach12g00445 1187 Pfam RNA polymerase Rpb2, domain 3 490 549 IPR007645 GO:0003677|GO:0003899|GO:0006351
Bach12g00445 1187 ProSitePatterns RNA polymerases beta chain signature. 937 949 IPR007121 GO:0003677|GO:0003899|GO:0006351
Bach12g00445 1187 Pfam RNA polymerase beta subunit 58 450 IPR007644 GO:0003677|GO:0003899|GO:0006351
Bach12g00445 1187 Gene3D - 747 933 IPR014724 GO:0003899
Bach12g00445 1187 FunFam DNA-directed RNA polymerase subunit beta 51 234 - -
Bach12g00445 1187 Pfam RNA polymerase Rpb2, domain 6 717 1084 IPR007120 GO:0003677|GO:0003899|GO:0006351
Bach12g00445 1187 FunFam DNA-directed RNA polymerase subunit beta 401 589 - -
Bach12g00445 1187 Pfam RNA polymerase Rpb2, domain 4 586 647 IPR007646 GO:0003677|GO:0003899|GO:0006351
Bach12g00445 1187 FunFam DNA-directed RNA polymerase subunit beta 1071 1185 - -
Bach12g00445 1187 CDD RNA_pol_B_RPB2 59 1183 IPR015712 GO:0003899|GO:0006351|GO:0032549
Bach12g00445 1187 Gene3D RNA polymerase Rpb2, domain 2 234 401 IPR037034 GO:0003677|GO:0003899|GO:0006351
Bach12g00445 1187 PANTHER DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2 50 1181 IPR015712 GO:0003899|GO:0006351|GO:0032549
Bach12g00445 1187 Pfam RNA polymerase Rpb2, domain 5 661 707 IPR007647 GO:0006351
Bach12g00445 1187 Gene3D RNA polymerase alpha subunit dimerisation domain 1071 1185 - -
Bach12g00445 1187 FunFam DNA-directed RNA polymerase subunit beta 814 933 - -
Bach12g00445 1187 Pfam RNA polymerase Rpb2, domain 7 1086 1184 IPR007641 GO:0003677|GO:0003899|GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00445 Bach-Chr12 3006073 3012555 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00445 K16252 - gmx:100815934 1908.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00445 12 3006073 3012555 Bach12g00445 12 3006073 3012555 ECH