Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00427 ATGCTTGTCTCTGGGGGATCGTTGGATCTGAATTGGTTCCTGCAATTGATTTTCACGCTCTTTCTAGTTGCTGTTGGATTGCTCCACTTGGTTAAGAACACGGCCTCCAAATACTTTGAGGTCGACGCCAATTTCGAAGGGGAGCAGCGCAGCGATCGAACTCCAATGCCCAGTGTTCACATGGACGATTCTGTTTGTGCTGTATGCGGCAATTTCGGCACTAAGAAGTGCTCACGCTGCAAAGCCGTACGATACTGCTCACAAAAATGCCAACAGTCGCATTGGAACTCTGGGCATAACTTAAAATGCAAGGATTTAGCTAATTGTGGGTTTAAAGCTTCTGCTGGGGGTAAAAGCTTATCTGTCATTGCCCTGGTACCTGCTCGCAGGACTTTAAGGCCTATAGAGCAGCCTAAAAATGGTCTTTTTCCTTATGACGAATTTGTTAAATATTTCAATTGGGACAAAATAGGATTTCCTCCATGTGGACTCCTGAATTGTGGAAACAGTTGCTTTGCAAATGTGGTTCTCCAATGTCTCTCATTCACAAGGCCACTTGTTGCCTATTTGTTGGACAAAGGCCATCGCAGACAATGCAGGCATAATGACTGGTGCTTTCTTTGTGAATTTCAAACCCACGTTGAAAGAGCAAGTCAGAGTTCACTGGCTTTTTCTCCAATGAATATACTTTCTCGTTTACCTAATATTGGTGGTACTTTGGGGTATGGAAGACAAGAGGATGCTCACGAGTTCATGAGATTTGCCATTGACACAATGCAATCCGTTTGCCTCGATGAATTTGGTGGAGAAAAAGCTGTCCATCCCAGTCTGCAAGAGACAACTCTTATTCAACACATTTTTGGTGGTCACCTTCAATCTCAGGTGTTTTGCACAAAATGTGAGAAGATTTCAAATCAGTACGAAAATATGATGGATTTAACGGTTGAAATTCAAGGAGATGCTGCCTCCCTGGAGGAATGTCTAGAACAGTTCACTGTCACGGAGTGGCTTCAAGGGGAAAACATGTATAAATGTGACGGGTGCAATGACTATGTCAAGGCATGGAAGCGTCTTACAGTTAAACAAGCTCCAAATGTCCTCACAATTGCCTTAAAAAGATTTCAGAGTGGGCGATTTGGAAAATTAAACAAGAGAATAACTTTTCCTGAGATGTTAGATCTCAGCCCTTACATGAGTGAAGCAGGAGATAGATCAGACATCTACAAGCTATATGCAGTTATAGTCCATGTAGATATGCTGAATGCTTCATTTTTTGGTCATTATGTCTGCTATATCAAAGATTTCCAGGGAAACTGGTATAGGATTGATGATTGGAAGGTCATGAATGTGGAATTGGAAGAGGTACTTTCTCAGGGGGCTTACATGCTTTTGTATACCAGGGTAAGTGCCCGGCCATCAGGCCTTCTTATCACTGAATCTTCAGGGAAGGCAGAAGAGCAAACAGTAGAGAATGTGAATGTGGAGCCTGGCGCAATCCAACAAGCTGAATGCCTCTCAAGTAGGAGGAGTGTGGCTTCCAATCGAAGTTCTGAGGTTTTGCCATCTAATAATAGCCTAGAATTGAATGTTTCTAGCTATGAAAATGAGTCATTGACTGGAACGAACTCTGATGTCAAAAGAGAGCATTCTGAGGATGCAGACATGATTGATGTGGGGTCGACTTCTGATTTTGCAAATAAGATTCCATGCAGTGCTGCTGAAGAGACTTCAGGCCGGATGGAAGAGCATGATGATACCAATATGGCTAAATCTGTTCCTTCTCCAAGTTTGCCAATTGATGAACATTATGTTTTTCAAAGCGCAAGAGAAGATTCAGAACATACAGATATGGTTAAACTCAAATCAAAAACATCAAAGGTCAATAGTGGCAATGGATATGCTAGTGCAAATAAATCTGCTATTCCCCTTGAAGATGCTCGTACGGTATATTCTGGCATTAGTTCTTTTCCCGCTGAAACATCCCCAGCTTAGGTGCATCCATTAAAGCGGGGATTGCCACTCTATAACTCTGAAACTGATGAAGGAAATGGAATCAAGAGAGTAGAAATATCAGGGCATAATTCGTAATTTACTAGGTGGAATTGTTATTGTTATTGTTGTTTGTCCATACCATTTGACGATCCCATCAGCAGAAAGAGGTGGTGAGTTGGGAATTTTTATCTAGGGTTTCATTATTTCCAGGAACCTTGGATCCTATAGTAACATTTTTAGATGGATTCTCT 2243 0.4186 MLVSGGSLDLNWFLQLIFTLFLVAVGLLHLVKNTASKYFEVDANFEGEQRSDRTPMPSVHMDDSVCAVCGNFGTKKCSRCKAVRYCSQKCQQSHWNSGHNLKCKDLANCGFKASAGGKSLSVIALVPARRTLRPIEQPKNGLFPYDEFVKYFNWDKIGFPPCGLLNCGNSCFANVVLQCLSFTRPLVAYLLDKGHRRQCRHNDWCFLCEFQTHVERASQSSLAFSPMNILSRLPNIGGTLGYGRQEDAHEFMRFAIDTMQSVCLDEFGGEKAVHPSLQETTLIQHIFGGHLQSQVFCTKCEKISNQYENMMDLTVEIQGDAASLEECLEQFTVTEWLQGENMYKCDGCNDYVKAWKRLTVKQAPNVLTIALKRFQSGRFGKLNKRITFPEMLDLSPYMSEAGDRSDIYKLYAVIVHVDMLNASFFGHYVCYIKDFQGNWYRIDDWKVMNVELEEVLSQGAYMLLYTRVSARPSGLLITESSGKAEEQTVENVNVEPGAIQQAECLSSRRSVASNRSSEVLPSNNSLELNVSSYENESLTGTNSDVKREHSEDADMIDVGSTSDFANKIPCSAAEETSGRMEEHDDTNMAKSVPSPSLPIDEHYVFQSAREDSEHTDMVKLKSKTSKVNSGNGYASANKSAIPLEDARTVYSGISSFPAETSPA 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00427 663 Gene3D - 54 108 - -
Bach12g00427 663 ProSiteProfiles Zinc finger MYND-type profile. 66 103 IPR002893 -
Bach12g00427 663 SUPERFAMILY Cysteine proteinases 158 470 IPR038765 -
Bach12g00427 663 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 162 468 IPR028889 -
Bach12g00427 663 FunFam Ubiquitin carboxyl-terminal hydrolase 15 57 107 - -
Bach12g00427 663 SUPERFAMILY HIT/MYND zinc finger-like 61 107 - -
Bach12g00427 663 Pfam MYND finger 66 103 IPR002893 -
Bach12g00427 663 ProSitePatterns Zinc finger MYND-type signature. 66 103 IPR002893 -
Bach12g00427 663 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 84 470 - -
Bach12g00427 663 MobiDBLite consensus disorder prediction 577 597 - -
Bach12g00427 663 FunFam Ubiquitin carboxyl-terminal hydrolase 15 156 476 - -
Bach12g00427 663 CDD Peptidase_C19E 161 465 - -
Bach12g00427 663 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 163 178 IPR018200 GO:0004843|GO:0006511
Bach12g00427 663 Gene3D Cysteine proteinases 159 473 - -
Bach12g00427 663 Pfam Ubiquitin carboxyl-terminal hydrolase 162 465 IPR001394 GO:0004843|GO:0016579
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00427 Bach-Chr12 2893210 2898370 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00427 5 488 Miscellaneous Gene Families AT4G31670 65.455 0.0 669
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00427 K11855 - gmx:100820594 889.797