Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00418 ATGGATTTACCAGAACAGGACCGGACTCATTACTATCTCAAGCGGACCTTCGATGAGATAAACTCTAACCCAGATAGCACATCTGATTGCTCAATTCAAAAGTCTCCATTTTCCAAGAAACCTAAACAATTTGACCTCCAAGGGTATCAATTAGAGGTGTTTGAAGTTGCAAGGAGGAGGAACACGATAGCAGTATTGGATACAGGGTCGGGTAAGACCTTTGTAGCCGTAATGCTTATTAAAGACATTTGGCAAGCTATCAAGGCTAGAGACCAATTTAAGGAGATAAAAGAATATACAAAGTTTGAAGTTGAGGAATACTATGGGACAAAAGGGGTTGATAATTGGAATTCAGAGAGATGGGAGAAGGAGATTAGCGACCATGATGTATTGGTTATGACACCTCAGATTCTCTTGGATGCCTTGAGAAAGGAATTCCTGAAAATAGAAACAATATGCTTCATGATTATTGATGAATGCCATAGAGCGACTGGAAACCATCCCTATGCAAAAATAATGAAGGAATTCTATCACAAAGCTAATGAAAAGCCGAAGATCTTTGGGATAACAGCATCACCTGTAGTTAAAAAAGGTGTTTCCCATACCATTGATTGTGAAGATCAAATTTCTAAACTTGAAAGCATCTTGGACTCCCAGGTGTATCCATCTTCAAAAGTGAGTTGTAGATATTATGACCAATCACAGCTTCCTGCAGTGAGTTTGAAGCCAAATATTGAAGCCTTATGGTCCAAGTTGGACGACTCATTGTCAGAATTGCAAAGATCAGTGCAAAGAAACTGTGAAGATATTAACAATAAGTTTAAGGCACTGCATAAGTGTATGACTGATGAACTTGCCGAAACTTTCTATTGCCTTGAAGATCTAGGACTCTTGTGCGCTTACGAGGCTGTTAAAATCAGTCTTGAGAATTTCCCTAACATTGAAGAAGATTGTGGAGTTTACAGAAAAATTTCTTTGGAGTATAAATTATTCCTTCAAAAAGTGTTGCAAATAATTGGAGAACGTCTACCTTTTGCTGATAGGAGTCTTTTGGAGCTTGACTTTGATTTATTAGATGCAGCAAATTTTGGATACATATCTCCGAAGTTGCTTGAACTTATTAAAATCTTCCTATCTTTTGGAGAATCTAGTCAAGTGTTTTGCCTTATCTTTGTTGAAAGAATCATCACAGCTAAGGTGGTTGAACGATTTGCAAAAAAAGTTTCCTGCCTATCTCATTTCACGGTTTCATCTTTAACTAGAAGCAACACATTAGTTGATGCTTTTTCCCCGAAGAGGCAGGAAAAGACGTTGGATTCATTCTGCTGTGGACAGGTCAATTTGTTATTTACTACTGATGTTCGGGAGGAGGGTATTCATGTGCCAAATTGCTCCTGTGTCATACGATTTGACCTACCCAAGACCGTTTCTAGTTATGTCCAATCTCACGGACGAGCTAGGCAATATGACTCCCAATTTATTTTGATGTTGGAGAGGGGCAACCTGAAGCAAAGAAATCAACTGTTTGACATTATCAGGAGTAAGCATTCCATGACTGAAGCAGCTATTAGTAGAGACCCCGATGCTTCTATTTCAAAGATGTGTACAGTAGACAAAGCAAATACATACTATGTGGATTCTTCTGGAGCATCAGTCACTTCAGATTCTAGCATTACTCTTATATATCAATATTGTGACAAGATTCATGGAGATAAGTATGATGTAAAGCCAATTTTTGAGATTTTGCCTAGCGGAGGGTGTTACAAGTGTAAACTAACGTTACCTCCTAATGCGGCTTTCCAAACAATAGTAGGTCCCTTGAGCAGAAATAAACATTTGGCAAAGCAGCTTGTATGTTTGGAAGCTTGTAAGAAGCTGCATCAAATGGGTGCTTTAAATGATCATCTTCTCCCAACCCTTGAAGAGCCTTCAGAAAGTGATCATATTTTGAACAAAAAGCAGTCAAGTGCAGGAACCACAAAAAGGAAGGAGTTACATGGCACAGCCAGCATTCGTGCTTTATGTGGGACTTGGGCAGATAAACCCAATGGCACTATGTTTTATGCCTATAAATTTGATTTCACCAGTAATATTGTCAGTGAAATTTACTCTGGGTTTGCTCTTCTGATTGAGTCAAAGCTTGATGATGATGTCGGCAATATTGAATTGGAACTATACTCGTTGTCAAAGATTGTGAAGACATCTGTCTCTTCATGTGGGCAGCTGTATTTGGATGCTGATCAGATTATGAAAGCAAAATTCTTCCATGAACTTTTCTTCAATGGTTTGTTTGGGAAGTTATTTGTTTGGTCCAAAGCAGCAGAAGGAAAACGGGAATTTTTACTTCAGAAAGACACAAGATCATTGTGGAACCCGTCAAACTTGTATTTTCTTCTACCACTAGAGAGGTTGAATAATATTTGTGAAGAATCTTGGAAAGTAAATTGGACCGCAATAAATTCTTGCGCTTCTGCCATAGAATTTGTAAGAAAGAGGTCTTTGTTGGGTGCTGGACATTGTGCGGATGACAGAAATGTCTCATTACCTTCTAATACCAGTTCATCAGAGACGGAATGCAAAGCCTCAAAAACGATTTACTTTGCTAACTGTGTTGTTGATGTTAACAATCTCAAAGATATGCTAGTTTTGGCCATACATAATGGAAGAATATACTGTATTATTGATGTTGCTAATAATTTATTTCCTGGAAGTCCTTTTGATGGAATCAATACGAAATCGGCCACAACTGAACATACCACCTTCTCTGAATATTATGGCAAAAGGTATGGGATTGTGCTGAGATATCCAGAACAGCCTTTGTTGCGTTTGAAGCAAAGTCATAACGCACACAACCTTCTTGTGAACTTCATTGAGGAAGCAGATGGTTGTAACAAGGCACTGCAACAAAAACCACAAGCACATGTTCACGTTCCAGCTGAGCTTCTATACATGCTGAACGTTCAAAGAGATGTGTTGAAGTCACTTTATTTACTACCATCACTGATGCGCCGGCTTGAATCTCTTATGCTAGCCAGCCAGCTTAGATTAGAGATAGATGGTCAAACTAGCAACTTAAGCATACCTAGTTCTTTGATTCTAGAAGCACTCACAACTTTAAGATGTACTGAAAACTTTTCACTGGAACGTCTTGAGTTGCTTGGAGATTCTGTCCTGAAGTATGCTGTGAGCTGTTGCCTCTTTCTTAAGGATCCAGATAAACATGAAGGGCAACTGTCTGCTAGACGCTCACAGGCTGTTTGTAATTCAACCTTACATCAACTGGGCACAAATCGTGCACTACAGGGATATATCCGCGAGTCTGCATTTGAGCCACGCCGTTGGGTTGCTCCGGGACAGAGTTGTATACACATTGTTCCTTGTAAATGTGGGGTGGAGACCCCCGAAGTTCCGTTAGATGGGAAGTTCCAAACTGAAGATCCATCTGTTGTGATTGGGAAAGTATGTGACAGGGGTCACCGGTGGATATGTTCAAAGACTATTGCTGATTGTGTTGAAGCTCTGATAGGTGCATACTATGTTGGTGGTGGACTGGTCGCTTCACTTCATGTGATGAAGTGGCTCCAGATTGATGCTGAACCTGAACAATCCTTGGTTCATAAAGCAATTACTGCTGCATCACTCCGCACCTATGTACCAAAAGGAAATGAGATTGCAAGCCTTGAAGAAAAATTAGGGTATGAATTTTCGGTCAAGGGACTCTTACTGGAGGCAATGACACATTTCTCTGTGCAAGAACTTGGGGTTGGCTACTGCTACGAGAGGCTTGAATTTCTTGGAGACTCGGTATTAGACCTGCTTATCACATGGCATCTTTATCAGAGTTACCCAGATATTGATCCAGGAGAGCTAACTGATTTGCGCTCTGCTTCTGTCAACAATGAAAATTTCGCTCAAGTTGCGGTTAGGCAAAACCTTCAACAGCATCTTCTGCATAGCTCTGAACTTTTACAAAGCCAAATAGCAGAATATGTGAAGGTCATTTCTGAATCGGACAACACCACCAGATCACTCCCAGGCATTAAGGGTCCGAAGGCACTTGGAGATCTTGTGGAAAGTATTGCAGGGGCTGTACTACTTGATACCAAGCTCAATCTTGATCAAGTGTGGAAAATATTTAAACCTCTGTTATCTCCGATTGTTACTCCTGATAATCTTCAACTACCTCCACTTCGTGAACTGTATGAGTTATGTGACTTTCACGGGTATTTTGCTAAAGAAAATTGTACACAGAAGGGACTCATGGTGCATGCCGTGATTAGTTTACAGCTGGAAGATGAGCTGCTGGTTCGAGATGGACAGGGTCCAAATAAAAAAATGGCAAAAGCAGAAGCTGCTTTCCATTTGTTAAAGGAAATTGAGAGGAAAGGAATTTCCAAGAAAAGAAGAGATAATCCTGATATGCATTCCTCAGAGGCAATAATATATAAAAGGCCCGAAGTGGATGAAACTAACTTGTCTGCAACTCCATCTAATGCCTTCTTGTCTCCCAAGGACGCTTCAGCGGAAATTCGTGATCCCAGTATTGCCACCCCAGTTACTATAACAATTGATATGAAGAAGGGAGGACCTCGGGCCACTCTGCATGAACTATGTAAGAGGCTGCAGTGGCCAATGCCAAAATATGAAGCAACAGAATATAGAGAAAAAACTGCATTTGAATTTGGCCAAGGCTCGGAAGCAAGAAAAGGGTTTCTCTGCTTTGTGTCAAAAGTAACTTTGTGCATACCCAATGATGGTTCTATCGATTGCAAAGGAGATGCTAGGGCTGATAAGAAAAGCGCTTTTGACTCAGCTGCAGTTGCGTTGTTTTATGATCTACAACGAGTGGGAAAACTCAAGATTGCTGATTCCTAA 4875 0.4035 MDLPEQDRTHYYLKRTFDEINSNPDSTSDCSIQKSPFSKKPKQFDLQGYQLEVFEVARRRNTIAVLDTGSGKTFVAVMLIKDIWQAIKARDQFKEIKEYTKFEVEEYYGTKGVDNWNSERWEKEISDHDVLVMTPQILLDALRKEFLKIETICFMIIDECHRATGNHPYAKIMKEFYHKANEKPKIFGITASPVVKKGVSHTIDCEDQISKLESILDSQVYPSSKVSCRYYDQSQLPAVSLKPNIEALWSKLDDSLSELQRSVQRNCEDINNKFKALHKCMTDELAETFYCLEDLGLLCAYEAVKISLENFPNIEEDCGVYRKISLEYKLFLQKVLQIIGERLPFADRSLLELDFDLLDAANFGYISPKLLELIKIFLSFGESSQVFCLIFVERIITAKVVERFAKKVSCLSHFTVSSLTRSNTLVDAFSPKRQEKTLDSFCCGQVNLLFTTDVREEGIHVPNCSCVIRFDLPKTVSSYVQSHGRARQYDSQFILMLERGNLKQRNQLFDIIRSKHSMTEAAISRDPDASISKMCTVDKANTYYVDSSGASVTSDSSITLIYQYCDKIHGDKYDVKPIFEILPSGGCYKCKLTLPPNAAFQTIVGPLSRNKHLAKQLVCLEACKKLHQMGALNDHLLPTLEEPSESDHILNKKQSSAGTTKRKELHGTASIRALCGTWADKPNGTMFYAYKFDFTSNIVSEIYSGFALLIESKLDDDVGNIELELYSLSKIVKTSVSSCGQLYLDADQIMKAKFFHELFFNGLFGKLFVWSKAAEGKREFLLQKDTRSLWNPSNLYFLLPLERLNNICEESWKVNWTAINSCASAIEFVRKRSLLGAGHCADDRNVSLPSNTSSSETECKASKTIYFANCVVDVNNLKDMLVLAIHNGRIYCIIDVANNLFPGSPFDGINTKSATTEHTTFSEYYGKRYGIVLRYPEQPLLRLKQSHNAHNLLVNFIEEADGCNKALQQKPQAHVHVPAELLYMLNVQRDVLKSLYLLPSLMRRLESLMLASQLRLEIDGQTSNLSIPSSLILEALTTLRCTENFSLERLELLGDSVLKYAVSCCLFLKDPDKHEGQLSARRSQAVCNSTLHQLGTNRALQGYIRESAFEPRRWVAPGQSCIHIVPCKCGVETPEVPLDGKFQTEDPSVVIGKVCDRGHRWICSKTIADCVEALIGAYYVGGGLVASLHVMKWLQIDAEPEQSLVHKAITAASLRTYVPKGNEIASLEEKLGYEFSVKGLLLEAMTHFSVQELGVGYCYERLEFLGDSVLDLLITWHLYQSYPDIDPGELTDLRSASVNNENFAQVAVRQNLQQHLLHSSELLQSQIAEYVKVISESDNTTRSLPGIKGPKALGDLVESIAGAVLLDTKLNLDQVWKIFKPLLSPIVTPDNLQLPPLRELYELCDFHGYFAKENCTQKGLMVHAVISLQLEDELLVRDGQGPNKKMAKAEAAFHLLKEIERKGISKKRRDNPDMHSSEAIIYKRPEVDETNLSATPSNAFLSPKDASAEIRDPSIATPVTITIDMKKGGPRATLHELCKRLQWPMPKYEATEYREKTAFEFGQGSEARKGFLCFVSKVTLCIPNDGSIDCKGDARADKKSAFDSAAVALFYDLQRVGKLKIADS 1624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00418 1624 FunFam Endoribonuclease dicer-like 1 1218 1390 - -
Bach12g00418 1624 Gene3D - 358 512 IPR027417 -
Bach12g00418 1624 SMART riboneu5 1030 1203 IPR000999 GO:0004525|GO:0006396
Bach12g00418 1624 SMART riboneu5 1239 1392 IPR000999 GO:0004525|GO:0006396
Bach12g00418 1624 SMART helicmild6 402 489 IPR001650 -
Bach12g00418 1624 CDD DEXHc_dicer 48 222 - -
Bach12g00418 1624 PANTHER DICER-RELATED 60 1467 - -
Bach12g00418 1624 Gene3D - 1535 1616 - -
Bach12g00418 1624 Pfam PAZ domain 875 1006 IPR003100 GO:0005515
Bach12g00418 1624 SUPERFAMILY RNase III domain-like 1223 1388 IPR036389 GO:0004525|GO:0006396
Bach12g00418 1624 ProSiteProfiles Dicer double-stranded RNA-binding fold domain profile. 557 646 IPR005034 GO:0016891
Bach12g00418 1624 Pfam Helicase conserved C-terminal domain 382 486 IPR001650 -
Bach12g00418 1624 ProSiteProfiles Ribonuclease III family domain profile. 1011 1183 IPR000999 GO:0004525|GO:0006396
Bach12g00418 1624 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 1439 1461 IPR014720 -
Bach12g00418 1624 MobiDBLite consensus disorder prediction 643 663 - -
Bach12g00418 1624 Pfam Type III restriction enzyme, res subunit 57 193 IPR006935 GO:0003677|GO:0005524|GO:0016787
Bach12g00418 1624 Gene3D Dicer dimerisation domain 552 648 IPR038248 -
Bach12g00418 1624 FunFam Dicer-like 104 1006 1195 - -
Bach12g00418 1624 Gene3D paz domain 861 984 - -
Bach12g00418 1624 SMART ultradead3 42 218 IPR014001 -
Bach12g00418 1624 SMART PAZ_2_a_3 846 1010 IPR003100 GO:0005515
Bach12g00418 1624 ProSiteProfiles Ribonuclease III family domain profile. 1224 1369 IPR000999 GO:0004525|GO:0006396
Bach12g00418 1624 Gene3D - 41 243 IPR027417 -
Bach12g00418 1624 Pfam Ribonuclease III domain 1260 1368 IPR000999 GO:0004525|GO:0006396
Bach12g00418 1624 Pfam Ribonuclease III domain 1048 1182 IPR000999 GO:0004525|GO:0006396
Bach12g00418 1624 FunFam Endoribonuclease dicer-like 1 552 647 - -
Bach12g00418 1624 Pfam Dicer dimerisation domain 557 641 - -
Bach12g00418 1624 SUPERFAMILY RNase III domain-like 1028 1197 IPR036389 GO:0004525|GO:0006396
Bach12g00418 1624 FunFam Endoribonuclease dicer-like 1 360 523 - -
Bach12g00418 1624 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 89 503 IPR027417 -
Bach12g00418 1624 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 53 211 IPR014001 -
Bach12g00418 1624 Gene3D Ribonuclease III domain 1215 1389 IPR036389 GO:0004525|GO:0006396
Bach12g00418 1624 Gene3D Ribonuclease III domain 1025 1196 IPR036389 GO:0004525|GO:0006396
Bach12g00418 1624 CDD RIBOc 1240 1392 IPR000999 GO:0004525|GO:0006396
Bach12g00418 1624 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 369 530 IPR001650 -
Bach12g00418 1624 ProSitePatterns Ribonuclease III family signature. 1260 1268 IPR000999 GO:0004525|GO:0006396
Bach12g00418 1624 CDD RIBOc 1030 1194 IPR000999 GO:0004525|GO:0006396
Bach12g00418 1624 ProSiteProfiles PAZ domain profile. 876 960 IPR003100 GO:0005515
Bach12g00418 1624 SUPERFAMILY PAZ domain 874 989 IPR036085 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00418 Bach-Chr12 2806360 2819428 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00418 K11592 - gmx:100806831 2008.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00418 12 2806360 2819428 Bach12g00418 12 2806360 2819428 ECH
Bach5g00962 5 6816218 6825540 Bach12g00418 12 2806360 2819428 ECH
Bach2g01396 2 23155338 23165330 Bach12g00418 12 2806360 2819428 ECH