Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00404 ATGAAGATTTGGTGCTGCCTATGCTTCAACGAAGAAGACGAGGAGGATTGCTATCATCGTCCAGGGTCTATGAAGGAGAAAGGCATTTTCGGAAACCAAGACTTGCCTGACGATACTTTCGAAAATGACGAAGACCCTCACGACGGCACTGCCGAGCCTTTAAGTCTCGCCGCAATTGACCGCGAGCACGACGAGCAATTGAGGTTGTTTGAGGAGATGGTCAGGGCTGTGCGTGTAGGTGCCTTTGCCTCTTGGTCTAACACCGGGCCTCGAACATCACGTCGCTCCGAGGGAGAGAGTAGCTCCGCTTCGGCTAATGCAACACCTGTTTTGGACAGTGGCGCAGAGGATAGCCGCGATTCTTACCACAAGCGTGCCAAAGTCCACTCTGATTTCGATGAGTGTCATTATGCAACTGCAGCATCTTCAAATACTGGGAAATCCATTGCATATGCTGATTACAGAGATTATGATAACAATCCGAGCTCATCTGTTCGATCTAATAATGACTTATGTTATGATGCTTTCACATTTATGGCTTCTGGTAAGGAGAGTAACTTTGATTCTAGCTGTGTGAAAGAGAATGACACAGATGACAGCGACATTTCTAAAGTAAAAGATCTGGAGGTCAGGATGGATCTTACAGATGACTTGTTACATATGGTTTTCTCATTCTTGGACCATCCTAATCTCTGCAAAGCCGCCGGAGTTTGTAGGCAGTGGCGAGCTGCTAGTGCACATGAAGATTTTTGGAGGTGTTTGAATTTTGAAGATCGGAACATATCTGTAGAGCAATTTGAGGATATGTGTAGGCGTTATCCTAATGCAACAGCAATGAACATATCTGGGCCTGCTATTCACTTACTTGTCATGAAGGCTATCTCTTCATTAAGGAATCTTGAGGTCTTAACATTGGGAAGAGGGCAGATAGGGGATACATTTTTCCATGCTTTAGCTGATTGTGCTGTGTTGAAACGATTGAACATCAATGATGCTACACTTGGCAATGGTATTCAGGAGATACCCATTAATCATGACAGATTGTGTCATCTTCAACTATCAAAATGCCGTGTAATGCGTATATCAGTCAGGTGCCCACAACTTGAAACTATGTCTTTGAAGCGCAGTAACATGGCACAGGCTGTGCTTAATTGCCCTATTCTGCATGAGCTTGACATAGGTTCCTGCCACAAACTTCCAGATGCTGCTATTCGCTCAGCTGCGACTTCATGCCCTCAATTACAGTCTTTGGACATGTCCAATTGTTCATGTGTCAGTGATGAAACATTACGTGAGATTTCTCTAAGTTGTGCTAATCTTAGTATTCTCGATGCCTCATACTGCCCAAACATATCTTTGGAGTCTGTTAGACTGCCATTGTTGACCGTTCTCAAGCTTCACAGCTGTGAGGGCATCACTTCAGCCTCAATGGCTGCAATAGCTCATAGTTATATGTTGGAGGTTTTGGAGCTCGATAATTGCAGCCTATTGACTTCTGTCTCATTGGATCTTCCACGTTTGCAAAATATTAGATTGGTGCATTGTCGCAAATTTGCTGATTTGAACTTGAGAACTATAATGCTATCTTCTATATTGGTGTCTAATTGCGCTGCTCTCCACAGGATCAATATCACTTCAAATTCACTTCAGAAATTAGCATTACAGAAACAAGACAGCTTGACCTCGTTAGCTCTGCAATGTCAATCTTTGCAAGAAGTGGACCTTACTGACTGTGAATCTCTGACAAACTCTGTATGTGATGTTTTTAGTGATGGCGGAGGATGCCCAATGTTGAAATCACTAATTCTTGATAACTGCGAGAGTTTGACTTCAGTTCGATTCATCAGTACCTCTTTAGTCAGTCTCTCCCTTGTTGGTTGCCGGGCAATTACTACTCTTGAGCTCACATGCCCTAATCTTGAGAAAGTTTGTTTGGATGGTTGTGATCACTTAGAAAGAGCATCATTTTGTCCTGTTGGCCTTCGGTCTCTAAATCTAGGAATATGTCCAAAACTGGATGTGCTCCGCATTGAAGCACCCGCTATGGTTTCACTTGAGTTGAAGGGATGTGGCGTACTATCTGAAGCATCTATTAATTGTCCACTCTTAACATCTTTGGATGCTTCCTTTTGCAGCCAACTCATGGATGATTGCTTGTCTGCAACCACTGCCTCATGCCCGTTGATTGAGTCACTGATATTGATGTCATGTCCGTCAATTGGTTCGGATGGGCTTTTTTCTCTGCGTAGGCTCCCAAATTTGACTTTTCTTGATTTATCATACACTTTCTTGACGAACTTGCTGCCAGTTTTTGAGTCTTGTTCTCAATTGAAGGTATTGAAGTTACAAGCGTGCAAGTATCTCACTGACTCATCTCTTGAGCCCCTTTACAAGGGAGGTGCTTTGCCAGCACTTCAGGAGTTGGACCTGTCTTATGGAACTCTGTGTCAATCTGCCATTGAGGAACTTCTTGCTTGCTGTACGCACCTCACACATGTGAGCTTGAATGGCTGTGTGAATATGCACGATTTGAATTGGGGTTGCAATCATGGAGATGTGTTGCCTGTTGTACGCCCCTCATCTGGCATGAATTCATGTGAGAATGTCCATGATGCTAGTGAGCAACCCAACCGTTTACTGCAAAATCTCAACTGCGTAGGATGTCCAAATGTTAGGAAAGTTCTCATTCCACCAACAGCTCGGTGTTTCCATTTATTATTTTTAAACCTTTCTTTGTCAGCAAATTTGAAGGAGGTTGATGTTGCTTGTCTCAACCTATGCTTTCTTAATTTGAGCAATTGTTCCTCTTTGGAAGTTTTGAAGCTAGAGTGTCCAAGATTAACTAGTCTGTTTCTTCAGTCTTGCAACATTGGCGAGGAAACTGTTGAAATTGCTATATCAAAATGCAGTATGCTTGAGACCCTTGATGTTCGCTTTTGTCCAAAGATAAGTCAATTATGCATGGGAAGATTACGCGCAGCGTGTGCTAGTTTGAAGCGTATATTCAGCAGCTTGTCAACTACTTGATTGCGACAAAAGGGTCTAATACTTTTTCCAGTGCTTATTTCACTTGTAGTGGAGGGAGGCACAGTTGGTAATAAATGTGGTTATTTTCTTGTGTTGTAAATGGTCGGCATTTTAACTCTTTTGTTTGGCGTATAGAAAATCATGTAACCATCTTTTTAAGTATTGTTGCAATAATAAATCATCGTTGTTGTACTGGTTAATCTTGTAAATCCTAAGTTTTTAAATTTTGTTGATCCGTATTTTACATGAGAGCAGCAGTCTAACTGGTCCTCCATTGCTGTAAGTCGGTGTATCTGAGCGTTTGTGGTATGACCCTTGAATGGTGCATGCCATTATTTGATGCTGTATATTATCTAGAGTTT 3389 0.4234 MKIWCCLCFNEEDEEDCYHRPGSMKEKGIFGNQDLPDDTFENDEDPHDGTAEPLSLAAIDREHDEQLRLFEEMVRAVRVGAFASWSNTGPRTSRRSEGESSSASANATPVLDSGAEDSRDSYHKRAKVHSDFDECHYATAASSNTGKSIAYADYRDYDNNPSSSVRSNNDLCYDAFTFMASGKESNFDSSCVKENDTDDSDISKVKDLEVRMDLTDDLLHMVFSFLDHPNLCKAAGVCRQWRAASAHEDFWRCLNFEDRNISVEQFEDMCRRYPNATAMNISGPAIHLLVMKAISSLRNLEVLTLGRGQIGDTFFHALADCAVLKRLNINDATLGNGIQEIPINHDRLCHLQLSKCRVMRISVRCPQLETMSLKRSNMAQAVLNCPILHELDIGSCHKLPDAAIRSAATSCPQLQSLDMSNCSCVSDETLREISLSCANLSILDASYCPNISLESVRLPLLTVLKLHSCEGITSASMAAIAHSYMLEVLELDNCSLLTSVSLDLPRLQNIRLVHCRKFADLNLRTIMLSSILVSNCAALHRINITSNSLQKLALQKQDSLTSLALQCQSLQEVDLTDCESLTNSVCDVFSDGGGCPMLKSLILDNCESLTSVRFISTSLVSLSLVGCRAITTLELTCPNLEKVCLDGCDHLERASFCPVGLRSLNLGICPKLDVLRIEAPAMVSLELKGCGVLSEASINCPLLTSLDASFCSQLMDDCLSATTASCPLIESLILMSCPSIGSDGLFSLRRLPNLTFLDLSYTFLTNLLPVFESCSQLKVLKLQACKYLTDSSLEPLYKGGALPALQELDLSYGTLCQSAIEELLACCTHLTHVSLNGCVNMHDLNWGCNHGDVLPVVRPSSGMNSCENVHDASEQPNRLLQNLNCVGCPNVRKVLIPPTARCFHLLFLNLSLSANLKEVDVACLNLCFLNLSNCSSLEVLKLECPRLTSLFLQSCNIGEETVEIAISKCSMLETLDVRFCPKISQLCMGRLRAACASLKRIFSSLSTT 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00404 1008 Pfam F-box-like 216 255 IPR001810 GO:0005515
Bach12g00404 1008 SUPERFAMILY RNI-like 661 1001 - -
Bach12g00404 1008 ProSiteProfiles F-box domain profile. 208 254 IPR001810 GO:0005515
Bach12g00404 1008 CDD F-box_FBXO41 216 252 - -
Bach12g00404 1008 SMART LRR_CC_2 637 662 IPR006553 -
Bach12g00404 1008 SMART LRR_CC_2 458 483 IPR006553 -
Bach12g00404 1008 SMART LRR_CC_2 437 457 IPR006553 -
Bach12g00404 1008 SMART LRR_CC_2 726 751 IPR006553 -
Bach12g00404 1008 SMART LRR_CC_2 567 592 IPR006553 -
Bach12g00404 1008 SMART LRR_CC_2 595 625 IPR006553 -
Bach12g00404 1008 SMART LRR_CC_2 411 436 IPR006553 -
Bach12g00404 1008 SMART LRR_CC_2 774 799 IPR006553 -
Bach12g00404 1008 SMART LRR_CC_2 969 1004 IPR006553 -
Bach12g00404 1008 SMART LRR_CC_2 385 410 IPR006553 -
Bach12g00404 1008 SMART LRR_CC_2 504 529 IPR006553 -
Bach12g00404 1008 SMART LRR_CC_2 700 725 IPR006553 -
Bach12g00404 1008 SMART LRR_CC_2 944 968 IPR006553 -
Bach12g00404 1008 MobiDBLite consensus disorder prediction 87 122 - -
Bach12g00404 1008 Gene3D Ribonuclease Inhibitor 859 1006 IPR032675 -
Bach12g00404 1008 PANTHER OS10G0396666 PROTEIN 197 1007 - -
Bach12g00404 1008 Gene3D Ribonuclease Inhibitor 208 453 IPR032675 -
Bach12g00404 1008 MobiDBLite consensus disorder prediction 87 111 - -
Bach12g00404 1008 FunFam F-box/LRR-repeat protein 15 isoform C 861 1004 - -
Bach12g00404 1008 FunFam F-box/LRR-repeat protein 15 767 852 - -
Bach12g00404 1008 SUPERFAMILY RNI-like 238 501 - -
Bach12g00404 1008 FunFam F-box/LRR-repeat protein 15 206 455 - -
Bach12g00404 1008 SUPERFAMILY RNI-like 493 793 - -
Bach12g00404 1008 SMART fbox_2 214 254 IPR001810 GO:0005515
Bach12g00404 1008 Gene3D Ribonuclease Inhibitor 675 765 IPR032675 -
Bach12g00404 1008 Gene3D Ribonuclease Inhibitor 536 674 IPR032675 -
Bach12g00404 1008 Gene3D Ribonuclease Inhibitor 454 535 IPR032675 -
Bach12g00404 1008 Gene3D Ribonuclease Inhibitor 766 850 IPR032675 -
Bach12g00404 1008 SUPERFAMILY F-box domain 213 244 IPR036047 GO:0005515
Bach12g00404 1008 MobiDBLite consensus disorder prediction 20 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00404 Bach-Chr12 2703166 2710620 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00404 - - qsa:O6P43_019140 1550.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00404 12 2703166 2710620 Bach12g00404 12 2703166 2710620 ECH