LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach12g00358	TATAATGGCTGACGAAGCACAGTATTCATCGGGCACAGAGACCACGCCCCACAAGCGCAGGTATGAGGAGCCATCGCCGGCTTCTCAAAGGCCCACAGGCTTCTCGGCGCCTATTGCACCTTCATCCCCCGACGGTGGCCACGCGCCGCTTCCTTCCTACAATAGCGTGCCTCCCCCGGCAAGTGGGATTGAGCTTGCCAAGCAGCGTGCTCAGGAGGTTGCTGCTCGCCTCTTAAATAACTATGGTGGTGGAGGAGGTGGTGGGTTGGATGCCAAGCGAGCAAAAATTGAGAATGGTGCTTCTGGGTTCGATTCCATTGATACGAAGCCGTCATTCTCAGCTCCCTCAGCTGCTCCCGTATCGTTTGCTTATCAGGGTACGAGCAAAAAGATAGATGTCCCTAATGGCAGGGTTGGTGTAATTATTGGTAAAGGTGGAGAGACGATCAAATATCTTCAAATACAGTCTGGGGCGAAGATCCAAGTTACCCGTGATATGGACGCTGATCCCAATTCTCCAACTAGGATGGTAGAGCTTATGGGTACTCCTGATCAAATTGCCACGGCTGAGCGTTTGATAAAAGACGTGCTTAGTGAGGCTGAAACCGGAGGTTCTGCCATGGTTTCTAGACGGCTGACTGGTCAAGCTGGGTCTGAGCAATTTGTGATGATAGTTCCAAATAACAAGGTTGGCCTTGTAATCGGTAAAGGAGGAGAAACAATAAAGCATATGCAAGCACAGTCTGGAGCACGAATTCAGGTGATACCTTTGCATCTTCCCCCAGGTGATATGTCCACTGAAAGAACATTGCAAATTGATGGGACAAGTGAACAAATCGAGTCTGCAAAAGAGTTGGTTAATCAAGTCATAAGCGAGAATCGTCTTAGAAATCCTGCAACTGCTGGTGGTTATCCTCAGCAAGGTTACCAAGCACGATCACAGTCTACCTGGGCTCCCCCTGGTCCTCCTATGCAACAACCTGGTTATAACTATGTGCAGCCTGGAGCATACTCTGGTCCATCACCTCAGTATAACCTGCCTCAGCCACCATATCCAGGATATCCTCCGCAATCTGGTGGATATTCTACCAATTGGGATCAGTCTACTATACCTCCTTCCCAGCAGTCTGCTCAGGGTAGTAGTTATGATTACTATAGTCAACAGCCACAGCAAAATCCCGGTGGTCCAGCACCTCCGGCTGATGGGACTGCTTACAATTACAGTCAGCCACCATCTTCTGGTTATAACCAACATGGTCAAGGTTATGGTCAGGACAGCTATGGTGGGTATCCTGCGCCACCTCAATTTGGGTATGGTCAGCCACCAACATACGAGCAGCAGCAAGGCTACAACTCAGCCCCCGGCTATGGTAGCGGGGGCAACCCAGTACAAGAGGGCCACACTTCCAACTATGGATCTCAAGGGGATTCAGCTCAAGCTATTCCTGTCCAACCTTCCTCAGTAGCCCAGCAAGGTTATGGTACTAACCAGCAACCTAGCCCAAATCCTGCTAACTATCCATCTCAAGGAAATGCTCAGTCAGGTTATGGGGTGCCACAAGCACCTTACAGCAATCTACCACAGGCACAGTCCGGTTATGGGCCCCCTCATTCCCAAAAACCAAGTGGCAATCCTCCTGTTTATGGACAGTCCATGCAATCACCTAGCACAGCGGGGAGCTATGGTCAATCTGGCCCTTTGCAATCTGGATATGCTGCTTCCCAGGCCTTGCCTTCTGGGTACTCTCAACCAGAATCCGGGTCTCAAAGGGCACCACCATCTGGTTATGGTTCTGCAGTGCAGCCAGGTTATGGTCAAGCACCACCATATGGTGCTCCTGCAGCAGGTGCTCAGCCTGGTTATGGTCAAGCACCACCACCATATAGCAGCAGTTATGGTGCTAGTTACACCCATCCTCCGGTATATTCTAATGATGGTAGCACTGGTGGTAGTACTCGTGGAACCTATGATGGAACAGCTGCACAGACTGGACAACAAGGTGGGGCTGCTAAGGCGTCACCTCAAAGTTGA	2032	0.5064	MADEAQYSSGTETTPHKRRYEEPSPASQRPTGFSAPIAPSSPDGGHAPLPSYNSVPPPASGIELAKQRAQEVAARLLNNYGGGGGGGLDAKRAKIENGASGFDSIDTKPSFSAPSAAPVSFAYQGTSKKIDVPNGRVGVIIGKGGETIKYLQIQSGAKIQVTRDMDADPNSPTRMVELMGTPDQIATAERLIKDVLSEAETGGSAMVSRRLTGQAGSEQFVMIVPNNKVGLVIGKGGETIKHMQAQSGARIQVIPLHLPPGDMSTERTLQIDGTSEQIESAKELVNQVISENRLRNPATAGGYPQQGYQARSQSTWAPPGPPMQQPGYNYVQPGAYSGPSPQYNLPQPPYPGYPPQSGGYSTNWDQSTIPPSQQSAQGSSYDYYSQQPQQNPGGPAPPADGTAYNYSQPPSSGYNQHGQGYGQDSYGGYPAPPQFGYGQPPTYEQQQGYNSAPGYGSGGNPVQEGHTSNYGSQGDSAQAIPVQPSSVAQQGYGTNQQPSPNPANYPSQGNAQSGYGVPQAPYSNLPQAQSGYGPPHSQKPSGNPPVYGQSMQSPSTAGSYGQSGPLQSGYAASQALPSGYSQPESGSQRAPPSGYGSAVQPGYGQAPPYGAPAAGAQPGYGQAPPPYSSSYGASYTHPPVYSNDGSTGGSTRGTYDGTAAQTGQQGGAAKASPQS	675

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach12g00358	675	MobiDBLite	consensus disorder prediction	356	390	-	-
	Bach12g00358	675	FunFam	KH domain-containing protein	212	312	-	-
	Bach12g00358	675	ProSiteProfiles	Type-1 KH domain profile.	217	285	-	-
	Bach12g00358	675	ProSiteProfiles	Type-1 KH domain profile.	125	192	-	-
	Bach12g00358	675	MobiDBLite	consensus disorder prediction	295	675	-	-
	Bach12g00358	675	MobiDBLite	consensus disorder prediction	404	422	-	-
	Bach12g00358	675	SUPERFAMILY	Eukaryotic type KH-domain (KH-domain type I)	220	292	IPR036612	GO:0003723
	Bach12g00358	675	SUPERFAMILY	Eukaryotic type KH-domain (KH-domain type I)	127	202	IPR036612	GO:0003723
	Bach12g00358	675	Gene3D	K Homology domain, type 1	122	212	IPR036612	GO:0003723
	Bach12g00358	675	Gene3D	K Homology domain, type 1	213	315	IPR036612	GO:0003723
	Bach12g00358	675	SMART	kh_6	216	290	IPR004087	GO:0003676
	Bach12g00358	675	SMART	kh_6	124	197	IPR004087	GO:0003676
	Bach12g00358	675	Pfam	KH domain	129	193	IPR004088	GO:0003723
	Bach12g00358	675	Pfam	KH domain	221	286	IPR004088	GO:0003723
	Bach12g00358	675	MobiDBLite	consensus disorder prediction	1	60	-	-
	Bach12g00358	675	PANTHER	KH DOMAIN CONTAINING RNA BINDING PROTEIN	119	492	-	-
	Bach12g00358	675	MobiDBLite	consensus disorder prediction	623	675	-	-
	Bach12g00358	675	MobiDBLite	consensus disorder prediction	439	594	-	-
	Bach12g00358	675	MobiDBLite	consensus disorder prediction	302	318	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach12g00358	Bach-Chr12	2388341	2393694	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach12g00358	K13210		-	jre:109008855	841.262

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bach12g00358	12	2388341	2393694	Bach12g00358	12	2388341	2393694	ECH