Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00305 ATGTGGAAGCAGATCAGAGACAGAGAAGCGGGAAAAGTCCGTCCAGATTCATTTGCTAATCGCATTAAGTCCAATCGCGTTGCTGAGCTTCAACTATCCAATTGCAAAGATATTGCAACCCCTCATAAAGGAGCCATAAACTCCCTTCAGATTGATTTGACAGAGGGAAGATACTTGCTATCTGCTGCGTCGGATGCATCAGTAGCTGTTTATGATGTTCAACAGGCCACAGACTATGATGCAGGTGGTCTGATATCTAGACACAAATGCATATTTGTTGTTGACAAGCAACATGAACTTGCGCACAAATACTCCATATCCTCGGCTATATGGTATCCTGTTGACACTGGTCTATTCATCACTGGATCATATGATCATCATATAAATGTTTGGGATACAAATACGACCCAGGTGGTTATGAATTTCAAAATGCCTGGAAAGGTCTATAGAACTGCCATGTCCACGTTGGCTACATCTCACATGCTGATCGCTGCTGGAACTGAGGATGTCCAGATTCGCCTTTGTGATATTGCTTCAGGGGCATTCGCTCACACATTGTCTGGTCACCGCGATGGAGTAATGGCTGCAGAATGGTCTACTTCAAGTGAATGGGTCTTAATAACTGGGGGATGTGATGGTGCAATACGTTTTTGGGACATCAGACGTGCTGGCTGTTTCCTAGTGTTAGATCAGTCCAGGACTCAGCTTGGAAGACGCCCACCCATTCTTAAACGCTCCATGATAACTAAGGATACAAAATCACGGGCTGCACAAAGGAAACTTGCTAATGGTAGTGGCAGCAGACAGTCCCCAATTGGTAGAGTCCCAGCTAAGGGGCCTATGAAACAGAGACTACATCCAGGGATGCTGTCTTCCCAGGATCGTGCGACAGCTCATTATGGTGCTGTGACAGGGTTAAAAATAACTGAAGATGGCATGTATCTCTTAAGTGCAGGATCTGATTCGAGATTGAGGTTGTGGGATATTGAATCTGGCTGTGACACGCTAGTGAACTTTGAAACATTGCGCCTACAAACCAGCAAGCCGATTCAGTTAGCCACCGCACCAGATTCAGCCTTTGTTTTTGTTCCATGCATGAGATCTGTGAAAATGTTTGACGCGTGGTCTGGGAACACCTATACAACATTCCGTGGGCATTATGAATGCGTAAACTCTTGCTGGTTTAGTCTACAAGATCAGGAATTATACACAGGTGGAAATGATAGACAAATTCTTGTCTGGTCACCAGCTAAATTAATTACGGACGAAGTGAATGAAGGACCAGATGAGGATCAGGACAACTGGAGTAACTAA 1314 0.4475 MWKQIRDREAGKVRPDSFANRIKSNRVAELQLSNCKDIATPHKGAINSLQIDLTEGRYLLSAASDASVAVYDVQQATDYDAGGLISRHKCIFVVDKQHELAHKYSISSAIWYPVDTGLFITGSYDHHINVWDTNTTQVVMNFKMPGKVYRTAMSTLATSHMLIAAGTEDVQIRLCDIASGAFAHTLSGHRDGVMAAEWSTSSEWVLITGGCDGAIRFWDIRRAGCFLVLDQSRTQLGRRPPILKRSMITKDTKSRAAQRKLANGSGSRQSPIGRVPAKGPMKQRLHPGMLSSQDRATAHYGAVTGLKITEDGMYLLSAGSDSRLRLWDIESGCDTLVNFETLRLQTSKPIQLATAPDSAFVFVPCMRSVKMFDAWSGNTYTTFRGHYECVNSCWFSLQDQELYTGGNDRQILVWSPAKLITDEVNEGPDEDQDNWSN 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00305 437 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 186 221 - -
Bach12g00305 437 FunFam Excision repair cross-complementation group 8 276 418 - -
Bach12g00305 437 ProSitePatterns Trp-Asp (WD) repeats signature. 206 220 IPR019775 -
Bach12g00305 437 PRINTS G protein beta WD-40 repeat signature 206 220 IPR020472 -
Bach12g00305 437 PRINTS G protein beta WD-40 repeat signature 119 133 IPR020472 -
Bach12g00305 437 PRINTS G protein beta WD-40 repeat signature 315 329 IPR020472 -
Bach12g00305 437 MobiDBLite consensus disorder prediction 254 290 - -
Bach12g00305 437 PANTHER DNA EXCISION REPAIR PROTEIN ERCC-8 1 436 IPR042238 GO:0006283
Bach12g00305 437 ProSitePatterns Trp-Asp (WD) repeats signature. 315 329 IPR019775 -
Bach12g00305 437 Pfam WD domain, G-beta repeat 297 328 IPR001680 GO:0005515
Bach12g00305 437 Pfam WD domain, G-beta repeat 97 132 IPR001680 GO:0005515
Bach12g00305 437 Pfam WD domain, G-beta repeat 379 415 IPR001680 GO:0005515
Bach12g00305 437 Pfam WD domain, G-beta repeat 184 219 IPR001680 GO:0005515
Bach12g00305 437 SUPERFAMILY WD40 repeat-like 38 417 IPR036322 GO:0005515
Bach12g00305 437 Gene3D - 1 418 IPR015943 GO:0005515
Bach12g00305 437 ProSiteProfiles Trp-Asp (WD) repeats profile. 39 81 IPR001680 GO:0005515
Bach12g00305 437 FunFam Transducin/WD40 repeat-like superfamily protein 2 265 - -
Bach12g00305 437 ProSiteProfiles Trp-Asp (WD) repeats profile. 296 337 IPR001680 GO:0005515
Bach12g00305 437 ProSiteProfiles Trp-Asp (WD) repeats profile. 99 141 IPR001680 GO:0005515
Bach12g00305 437 SMART WD40_4 32 72 IPR001680 GO:0005515
Bach12g00305 437 SMART WD40_4 87 132 IPR001680 GO:0005515
Bach12g00305 437 SMART WD40_4 179 219 IPR001680 GO:0005515
Bach12g00305 437 SMART WD40_4 289 328 IPR001680 GO:0005515
Bach12g00305 437 SMART WD40_4 376 415 IPR001680 GO:0005515
Bach12g00305 437 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 296 332 - -
Bach12g00305 437 ProSiteProfiles Trp-Asp (WD) repeats profile. 383 415 IPR001680 GO:0005515
Bach12g00305 437 ProSiteProfiles Trp-Asp (WD) repeats profile. 186 221 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00305 Bach-Chr12 2023709 2027005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00305 97 226 Miscellaneous Gene Families AT5G08390 25.385 1.30e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00305 K10570 - qsa:O6P43_019014 756.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00305 12 2023709 2027005 Bach12g00305 12 2023709 2027005 ECH