Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00225 ATGATTCCCCTGGCACTAGCCAGTAGTCATGGGCTCAATGCCGCAGGTGCTTTGCAAGCAAAGAATACATGCTTGCTGCCGCGAACCTGTCAGAATGTTACGGTTCTAAGCATAGATGGGGGAGGTATAAAGGGTGTGATTCCAGGAGTCGTACTTGGTGCCCTTGAAAAGGGCCTTCAGGATTTGGATGGTAAGGATGCTAGACTCGCCGACTATTTCGATGTGATTGCAGGGACAAGCACAGGGGGCCTAGTCACTACCATGCTTACTGCCCCTGATGAAAATAACCGACCCCTGTATGCAGCCGAAGAAATCAAGGACTTCTACCTTGAACACTGCCCTAAGATTTTCCCACAATACAAACCCAAATTGTTCCCCAATTTTGCAAATCTCGTAAAGGCTATATCGGGACCAAAATACAACGGCAACTATTTACATGGTCTACTTAAGGAAAAGCTCGGAGACAAGACACTGCACCAAACGCTTACCAACGTTGTCATCCCAGCATTCGACCTCTACACTCTTCAGCCCACCATCTTTTCCAGTTTTCAGCTTCAGAAAGACCCAAGCTTAAACGCCAAGCTTTCGGATATATGCATCGCAACTTCGGCGGCACCCACCTATCTCCCTGCTCATCATTTTCTAACAACAGACGGCGATGGGAAAGTCAGAAACTTCCACCTCACGGATGGGGGCGTTGCTGCAAACAATCCGGCACTGATAGCAATTAGTGAATTAACAAAGCAACTTATTGAAGGAGGCCCCTTAAGACCAACCGAATACGGCCGTTTTTTGGTTGTATCGATAGGAACGGGGGCGCCTAAAGATCAACCGAAATACAATGCAAGGGATGCAGCTAAATGGGGGATCTTGAATTGGCTAATTTATGGGCGATCCAACCCTTTGATTGATGTCTTCACTCAAGCTAGTGCCGACATGGTTGACTTTCACCTCTCTGTTGTTTTTCAAGCTCTCCACTCTCAAAATTCTTATCTCCGGATTCAGGACGATACGTTGAGTGGAGAATTAGATTCTGTTGACACGGCCACAGAGGAGAATTTGGATGCTCTTGTTAATCGTGGTGAACAGTTATTAGCCAAGAGACTTTGCAGGGTTAACTTGGAAACTGGCAAGTTTGTACCCTGTGAATCTAGCAACGAGACCAATGAACAGGCTCTCAAGAGGTTTGCAAAAATGTTATCAGAAGAGAAGCGGCGCCGGCAATCTGGAACACACAGTTGA 1242 0.4678 MIPLALASSHGLNAAGALQAKNTCLLPRTCQNVTVLSIDGGGIKGVIPGVVLGALEKGLQDLDGKDARLADYFDVIAGTSTGGLVTTMLTAPDENNRPLYAAEEIKDFYLEHCPKIFPQYKPKLFPNFANLVKAISGPKYNGNYLHGLLKEKLGDKTLHQTLTNVVIPAFDLYTLQPTIFSSFQLQKDPSLNAKLSDICIATSAAPTYLPAHHFLTTDGDGKVRNFHLTDGGVAANNPALIAISELTKQLIEGGPLRPTEYGRFLVVSIGTGAPKDQPKYNARDAAKWGILNWLIYGRSNPLIDVFTQASADMVDFHLSVVFQALHSQNSYLRIQDDTLSGELDSVDTATEENLDALVNRGEQLLAKRLCRVNLETGKFVPCESSNETNEQALKRFAKMLSEEKRRRQSGTHS 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00225 413 Gene3D Cytosolic phospholipase A2 catalytic domain 26 412 - -
Bach12g00225 413 Pfam Patatin-like phospholipase 36 243 IPR002641 GO:0006629
Bach12g00225 413 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 36 243 IPR002641 GO:0006629
Bach12g00225 413 FunFam Patatin 25 412 - -
Bach12g00225 413 CDD Pat17_isozyme_like 31 377 - -
Bach12g00225 413 PANTHER XYLOSE ISOMERASE 27 409 - -
Bach12g00225 413 SUPERFAMILY FabD/lysophospholipase-like 32 376 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00225 Bach-Chr12 1542364 1544179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00225 18 407 Miscellaneous Gene Families AT2G26560 59.500 1.29e-161 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00225 - - qsu:112005054 526.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00225 12 1542364 1544179 Bach12g00225 12 1542364 1544179 ECH