Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach12g00074 ATGCAGCAAGGAGATTACAGCTCCGCTCCATATTATCAACACCCTCCCAATCCCGCGGATCCACACCCGAACCCTTACGCCTCCGCACCTCCGTTCAATTCCGGTTATGCCCCCTCTGATTACACGGCTTACGCCTCTAATTATCAATCATACCCGCATAATCCTGATCCAGCTCCGTCTCCTGCCCCTCCTACTGCACCTTCATACCCTCCAACTTCCAACCCTAATTTGCAGTCATTCAATTCCGCTTCTCAAGCCTCCTCCTTTCCTCCGTTTGAGTCCCATATTCCATACCAACCACCGTCGCAGCAACAATCGTATTATCCCTCGTATGATCAACATCAAACGGCCCCAAGTTATACTCCTCCCCCCTCCTCTATTCCTCCTAATCTCAATCCCAATTCTTCATACTTACCCTTGAACTCTGCTCCGTACACTCACCCTGGATCTTCTGTGCCACCTACGTACGAAAATCCTTATGAGAATCCTGTGAAAGTTGATGGTGGTATTGCTTATTTGGATGACAAGTACGGAAGTTTTAACCGGAGCCGCTCGGATTTGGGATCGGATTTCTATGGGAAGCGCCAGGATAGCGGATTTTCGAGGTATGATATTGGTCGTGATGAAGTTTACAGTGATGGCGTGTATGCTTATGAAGGGGACAAAACGGAACCTTATGGAGCTCGGGGTACGGCTCCTAAGTCTTCAACTTGGTCCGCCTTTGATGACTTTGGGAGGCCAATCAGTTTTAGCTCTCCGAAAGAATCCTCTATGACAAGCAAGATTGCAAAAGCAGTGCCGAAGGCTGATGTCCAAGAAGATGTAAAAAGCAGAGTACAAAAATTTCGGGTCAAACTATTAGCAGAAAATGGTGGTCAGAGCACTATGGATGTGCTGTGTCAGATTGGATTAGATGGAATTCGTATGCTGGATCCAAGTACCAGTCGTACATTGAGAATATATCCTCTTGAGAACATTACAAGATGTGAAAGATACGACTCATCTACCTTTGCATTTTGGTCCAAGACCTCGGTGGATATTGAGCCAAGACGAATCAGATTGCAATCCAATAGCTACACTACCAGCACACTTCTGGATACTGTGACTGCGGCAACCATACAGTTCAAGGAAATGGGTGGGACCAGGAGGCCTGCAGAATCATTGAAAACAAATGAACAGCAAACAGAAAAGAAGAAAGGCCTGGTTGATTGGGTGAACTTGATAAAACCAGCCAATGAAGAGAAGGATCATTGGGTCCCGGATGAAGCAGTCTCTAAATGTACTGCATGTGGCACCGATTTCTCGGCTTTTGTTCGTAAGCATCACTGTAGGAACTGTGGGGATATTTTCTGTGACAAATGTACACATGGTAGAATTGCTCTAACTGCTGATGAGAATGCTCAGCCAGTGCGAGTCTGTGACAGATGCATGGCAGAAGTTACTCAGAGGCTCAGTAATGCTAAAGAGGCAGCAAGTAAGCCTGCGTTGCAGAGTCATGAAGATCTAGCGAGGAAACTTCGGGAGGAACTGGAGAGGAATCGGAAGACATCAGGCTCCAAATCTGATGGCTCTGGAAGACGGATGAAGGAAGTTGCATGTCCTACTTGCACCGTCCATCTGCAGGTCCAAGTACCTAGCTCAGGTTCGGAAACTATTGAGTGTGGTGTTTGCCAGCACCCATTTCTCGTGAGTGCTCATTAA 1701 0.4697 MQQGDYSSAPYYQHPPNPADPHPNPYASAPPFNSGYAPSDYTAYASNYQSYPHNPDPAPSPAPPTAPSYPPTSNPNLQSFNSASQASSFPPFESHIPYQPPSQQQSYYPSYDQHQTAPSYTPPPSSIPPNLNPNSSYLPLNSAPYTHPGSSVPPTYENPYENPVKVDGGIAYLDDKYGSFNRSRSDLGSDFYGKRQDSGFSRYDIGRDEVYSDGVYAYEGDKTEPYGARGTAPKSSTWSAFDDFGRPISFSSPKESSMTSKIAKAVPKADVQEDVKSRVQKFRVKLLAENGGQSTMDVLCQIGLDGIRMLDPSTSRTLRIYPLENITRCERYDSSTFAFWSKTSVDIEPRRIRLQSNSYTTSTLLDTVTAATIQFKEMGGTRRPAESLKTNEQQTEKKKGLVDWVNLIKPANEEKDHWVPDEAVSKCTACGTDFSAFVRKHHCRNCGDIFCDKCTHGRIALTADENAQPVRVCDRCMAEVTQRLSNAKEAASKPALQSHEDLARKLREELERNRKTSGSKSDGSGRRMKEVACPTCTVHLQVQVPSSGSETIECGVCQHPFLVSAH 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach12g00074 566 MobiDBLite consensus disorder prediction 54 71 - -
Bach12g00074 566 FunFam Zinc finger, FYVE-type, endofin 408 486 - -
Bach12g00074 566 MobiDBLite consensus disorder prediction 14 28 - -
Bach12g00074 566 Pfam FYVE zinc finger 417 481 IPR000306 GO:0046872
Bach12g00074 566 SUPERFAMILY PH domain-like 284 341 - -
Bach12g00074 566 SMART fyve_4 413 482 IPR000306 GO:0046872
Bach12g00074 566 MobiDBLite consensus disorder prediction 1 161 - -
Bach12g00074 566 MobiDBLite consensus disorder prediction 39 53 - -
Bach12g00074 566 SUPERFAMILY FYVE/PHD zinc finger 416 488 IPR011011 -
Bach12g00074 566 MobiDBLite consensus disorder prediction 72 120 - -
Bach12g00074 566 Coils Coil 496 516 - -
Bach12g00074 566 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 408 486 IPR013083 -
Bach12g00074 566 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 421 481 IPR017455 -
Bach12g00074 566 PANTHER PROTEIN FREE1 1 566 IPR045893 GO:0036258|GO:0043130
Bach12g00074 566 MobiDBLite consensus disorder prediction 131 157 - -
Bach12g00074 566 CDD FYVE_EEA1 418 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach12g00074 Bach-Chr12 545530 549887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach12g00074 409 495 EF-hand Containing Proteins AT3G14270 33.673 1.75e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach12g00074 - - qsa:O6P43_018705 837.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach12g00074 12 545530 549887 Bach12g00074 12 545530 549887 ECH