Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00896 ATGCAGCGTTTGCCAGCTCAAATCTGCAGTAGAGTTGTTAGGCCAGCATGCGATGTGTTCCTTAACCACCGTGGGATCGACACCAAGAGAACTCTTGTTCGATTGCTCTACGACCAACTGACTAAGCTTAAAGTCAAGGCCTTCTTGGACACCGTGAGCATGAAGCCAGGAGATAGGCTATTCGATCATATTCATAGGAACATACTCGAGTGTAAGGTCGGTGTTGCTGTCTTCTCACCTCGTTATTGTGAGTCATATTTCTGTCTTCATGAGCTTGCCCTTCTCATAGAATCCAAGAAAACAGTCATCCCCATTTTCTTCGACGTGAAACCCTCTCAGCTCAAGGTTAAGGACTATGGAAGCCTTCCAGCTAAAGAGCTCCAAAGGTTTAGTTTAGCACTTGAGGAAGCTAAATACACTGTGGGACTTACTTACAACTCATCAGATGGGGACCGGTTGGAGCTGGTTCGAAACGTTTCAAATGCAGCGGGTTTCTGCCATTTTGCTTCCTACCACTCCTCTATTCTGCTTCCATGTCCTGAAATCCTGGCGAAAATATGCTCTGTTGTGCAACGAGTTGATGGAAGCCTGCTGCAATCCTTGATCTACGCCGAAAATGGTGAGGAAGAAGAAGAAGTTCTTGATTTAGTTAATGCAACAGAGAAGGCACTTCAGTTGCGCAATAATTGTAATTCTCTAGTCAAAGGGAATGCTAAATCTAGAGCAGAGTTTTTTGCTGGTCAAACTTATCAGGGTTTGAATATGGATCACGAGAATCTAAGAAGCTCTCTCTTCGTCAGTTTTTCACCCATTATTTCTCAAGTACTAAACCGAATCGAGGTGCTGTTCGAGGTTGTTGAAAACATTGCTCGGAAATATGGTGTAAGTAAAAGTGATTTGCTTGACAGAGAAGCTGATGATCTTGCTGTGCGTATTGCTCTGGGAGAAACACAAGTTATTGCAGAGACCAAAAATGCCCTTACAAATGCTGGAGTGAATGTAGATGCTTTGGAGGAATTTGCCAGCGGTAAAGTTGATGGTGCAAAAAGAAGTAATCATGTGCTTGTAGCGAAGAATTTTCCCTATGGTTCTTCAGAAAATGAACTGGCAAAGATGTTTGGGAAATATGGTAGTTTGGATAAAATAATTCTCCCTCCAACAAAAACATTGGCCTTGGTTGTTTTTCTTGAACCAGTTGAAGCTCGAGCTGCTTTTAGAGGGTTAGCTTACAAGCGTTACAAGTAA 1245 0.4281 MQRLPAQICSRVVRPACDVFLNHRGIDTKRTLVRLLYDQLTKLKVKAFLDTVSMKPGDRLFDHIHRNILECKVGVAVFSPRYCESYFCLHELALLIESKKTVIPIFFDVKPSQLKVKDYGSLPAKELQRFSLALEEAKYTVGLTYNSSDGDRLELVRNVSNAAGFCHFASYHSSILLPCPEILAKICSVVQRVDGSLLQSLIYAENGEEEEEVLDLVNATEKALQLRNNCNSLVKGNAKSRAEFFAGQTYQGLNMDHENLRSSLFVSFSPIISQVLNRIEVLFEVVENIARKYGVSKSDLLDREADDLAVRIALGETQVIAETKNALTNAGVNVDALEEFASGKVDGAKRSNHVLVAKNFPYGSSENELAKMFGKYGSLDKIILPPTKTLALVVFLEPVEARAAFRGLAYKRYK 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00896 414 Gene3D - 345 414 IPR012677 -
Bach11g00896 414 PANTHER COP1-INTERACTING PROTEIN-RELATED 16 162 - -
Bach11g00896 414 Gene3D - 13 164 IPR035897 -
Bach11g00896 414 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 115 IPR035897 -
Bach11g00896 414 SUPERFAMILY RNA-binding domain, RBD 344 410 IPR035979 GO:0003676
Bach11g00896 414 SMART till_3 16 162 IPR000157 GO:0007165
Bach11g00896 414 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 353 414 IPR000504 GO:0003723
Bach11g00896 414 ProSiteProfiles TIR domain profile. 15 163 IPR000157 GO:0007165
Bach11g00896 414 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 358 410 IPR000504 GO:0003723
Bach11g00896 414 Pfam TIR domain 18 123 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00896 Bach-Chr11 7822717 7833446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00896 14 146 Miscellaneous Gene Families AT1G57670 29.252 7.51e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00896 K14787 - gmx:100798207 251.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach11g00896 11 7822717 7833446 Bach7g00660 7 17480461 17481269 BWGD