Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00803 ATGGATTTTCATTATATTATTGGAGGAATTCTAGCTTCTACCTTGGGATTTGTATTTGCTCTATACAGTTTAGCGAAGAAGAAGAACAAGAATAACGAACGTTCAATCCATGTAAAAAGCAACTGGTGTTCAAAGATATCAGAAGATGGATTATCCCCACCAGAGGTTGCAGGAAGTACAGATATAATCATTGTGGGTGCTGGGGTTGCTGGTGCAGCTCTTGCTTATACACTTGGAAAGGATGGGCGGCGAGTCCATGTTATTGAGAGGGACTTGAGCGAGCCTGACAGGATTGTGGGTGAATTACTACAACCTGGGGGCTTTCTGAAGTTACTTGAGCTGGGTCTTGAAGATTGTGTAGATAAAATTGATTCCCAGAGAGTCTTCGGCTATGCTCTTTATAAGGATGGGAAAAATGCCAAACTATCATATCCCTTGGAAAAATTTGACTCTGATGTTTCTGGGAGAAGCTTTCATAATGGCCGTTTCATACAGAGAATGCGAGAAAAGGCTGTTTCTCTTCCAAACGTAAGATTAGAACAAGGAACAGTTACATCTCTACTTGAAGAAAATGGAACCATCAAAGGGGTCCACTACAAAACCAAGAGTGGACAAGAGCTCACAGCAAAGGCTCCCCTCACCATGGTATGTGATGGTTGCTTTTCCAACTTAAGGCGTTCTCTTTGCGACCCGAAGGTTGATGTACCATCGTACTTTGTTGGCCTAGTCTTGGAGAACTGTAATCTTCCATATGAAAACCATGGACATGTTATCTTGGGTGATCCTTCACCTATTTTGTTTTATCCCATCAGTAGCACTGAGATTCGCTGTTTGGTTGATGTGCCTGGACAAAAAGTACCTTCCATTGCCAACGGTGAAATGGTCAGTTATTTGAAAACTGTGGTAGCTCCTCAGGTTCCCCCAGAACTCTATACTGCTTTCATAGCTGCAATTGATAAAGGGAACATAAGAACCATGCCAAACAGAAGCATGCCTGCCTCTCCTCATCCCACACCCGGTGCACTTTTGATGGGAGATGCCTTTAATATGCGTCACCCTTTAACCGGAGGAGGAATGACTGTGGCCCTAGCTGACGTTGTCGTGCTAAGGGACCTACTTCGACCTCTGCATGATCTGCATGATGCTTCTGCTCTTTGCAAATATCTTGAATCATTCTACACACTACGTAAGCCAGTGGCGTCTACAATAAACACATTAGCAGGTGCATTATACAAAGTGTTTTGTGCATCCCCTGACCCTGCAAGGAAGGAAATGCGTCAAGCTTGTTTTGATTATTTAAGTCTTGGAGGTGTTTTCTCAGATGGACCAATATCTCTACTCTCTGGTCTAAATCCTCGCCCATTGAGCTTGGTTGTCCATTTCTTTGCAGTGGCTGTTTATGGTGTTAGCCGTTTATTGATACCATTTCCATTTCCAAAGCGCATTTTGCTTGGAGCTAGATTGATTGCAGGTGCAGCAGGCATCATTTTCCCAATTATCAAAGCTGAAGGAGTGAGAGAAATGTTCTTCCCAATTACAGTGCCAGCATATTACAGAAATGCTCCTGTTCATTAG 1575 0.4324 MDFHYIIGGILASTLGFVFALYSLAKKKNKNNERSIHVKSNWCSKISEDGLSPPEVAGSTDIIIVGAGVAGAALAYTLGKDGRRVHVIERDLSEPDRIVGELLQPGGFLKLLELGLEDCVDKIDSQRVFGYALYKDGKNAKLSYPLEKFDSDVSGRSFHNGRFIQRMREKAVSLPNVRLEQGTVTSLLEENGTIKGVHYKTKSGQELTAKAPLTMVCDGCFSNLRRSLCDPKVDVPSYFVGLVLENCNLPYENHGHVILGDPSPILFYPISSTEIRCLVDVPGQKVPSIANGEMVSYLKTVVAPQVPPELYTAFIAAIDKGNIRTMPNRSMPASPHPTPGALLMGDAFNMRHPLTGGGMTVALADVVVLRDLLRPLHDLHDASALCKYLESFYTLRKPVASTINTLAGALYKVFCASPDPARKEMRQACFDYLSLGGVFSDGPISLLSGLNPRPLSLVVHFFAVAVYGVSRLLIPFPFPKRILLGARLIAGAAGIIFPIIKAEGVREMFFPITVPAYYRNAPVH 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00803 524 FunFam Squalene monooxygenase 2 55 434 - -
Bach11g00803 524 PANTHER SQUALENE MONOOXYGENASE 8 522 IPR040125 GO:0004506|GO:0016126
Bach11g00803 524 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 338 353 - -
Bach11g00803 524 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 353 369 - -
Bach11g00803 524 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 210 225 - -
Bach11g00803 524 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 61 83 - -
Bach11g00803 524 Pfam Squalene epoxidase 210 482 IPR013698 GO:0004506|GO:0016020|GO:0050660
Bach11g00803 524 Pfam NAD(P)-binding Rossmann-like domain 64 90 - -
Bach11g00803 524 Gene3D - 52 414 IPR036188 -
Bach11g00803 524 SUPERFAMILY FAD/NAD(P)-binding domain 60 435 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00803 Bach-Chr11 6708031 6710539 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00803 20 523 Miscellaneous Gene Families AT1G58440 76.877 0.0 798
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00803 K00511 - gmx:100808856 855.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach11g00803 11 6708031 6710539 Bach11g00803 11 6708031 6710539 ECH