Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00727 ATGGCTTCTCTCAATATCACCTATTCTTCCACAGCAGCTCTCTCGCGCCCACGGACAAGGAAACACTTCAAGTTGTTCAATCGGTTACACAATTTTAATACTTTTCTTGTAAATAGACATAGATCTGAGTTGGCATTTATCCGACTGGATTCTAAGTTCTCAAGTGACAATGGTGTTACTAGACCCAAAGCAACGTTGACCTCTGGAGGAGGTGACCTTCTTTCTTATCCGAATGCTGCTGATGTTGTGATAACTGAAGATCTCGTTGGCAAGGATTCAGTAGGAATTGAGATGCAACCTGATGCAATAGCATTTGGAACACTTGCAGCTGACACAGCACTAACAAGTATTGGCTTTCCTGATGACAATGATGAATTTGATTTGGACAGCCCCACAGAAGGTTTTGCTTCCATTCCAGAGGCCATTGAAGACATTCGACAGGGAAAGATGGTATTGGTAGTGGATGATGAGGACAGAGAAAATGAAGGAGACTTGATAATGGCAGCACAGTTGGCAACACCTGAGGCCATGGCTTTTATTGTGAAGCATGGAACTGGGATAGTTTGTGTAAGTATGAAAGAGGAAGATCTGGAGAGATTGGAACTTCCTTTGATGGTAAGCAGTAAAGATAATGATGAGAAACTACGCACGGCATTCACTGTGACAGTGGATGCTAAACAAGGTACCACCACAGGGGTATCAGCTCAGGATAGGGCAACAACAGTGTTGGCTCTTGCATCTAGAGATTCAAAGCCTGATGATTTCAATCGCCCAGGCCATATATTTCCCCTAAAATACAGGGAAGGTGGTGTCTTGAAGAGAGCTGGTCACACCGAAGCTTCAGTTGATCTTGCTGTGCTTGCTGGGTTGGATCCTGTCGCCGTTCTCTGTGAGGTGGTTGATGACGATGGTTCTATGGCTAGATTACCTAAGCTTCGTGAATTTGCAAAGTGTGAAAATTTGAAAATTGTTTCTATTGCTGACTTAATAAGATATAGAAGGAAGAGAGATAAATTAATAGATCGTGCTGGTGCTGCAGTAATACCTACAATGTGGGGACCATTCACAGCTTACTGCTATAGGTCCCATTTGGATGGGATTGAGCATATTGCTATGGTTAAGGGAGACATCAGAGATGGACAAGATGTTCTTGTGAGGGTACACTCAGAGTGTCTCACCGGAGACATATTTGGATCTGCCAGATGTGACTGTGGGAATCAGCTTGCGCTTGCAATGCAGCAAATTGAGGCTGCTGGTAGAGGCGTACTGGTATATTTACGTGGACATGAAGGAAGAGGTATTGGATTGGGCCACAAGCTTCGTGCTTATAAACTACAGGATGCTGGACGAGATACTGTTGAAGCCAATGAGGAATTGGGATTGCCAGTTGATTCACGGGAGTATGGAATTGGAGCACAGATACTGAGAGACTTGGGTGTTCGATCCATGAAGTTGATGACAAACAACCCATCAAAATATGTTGGGCTCAAGGGATATGGTTTGACAATTTCCGGTAGGATTCCCTTACTGACACTTATCACAAAGGAGAACCGGAGATATTTGGAGACCAAAAGTGTGAAAATGGGCCATGTTTATGGCCTAGATTTCAATGGCAAATTAAGCAGTTACGACAATGGCAATGGCAAAACCAGTACTGGTGATTCTAACGATGTTACAGGATCATAA 1686 0.4365 MASLNITYSSTAALSRPRTRKHFKLFNRLHNFNTFLVNRHRSELAFIRLDSKFSSDNGVTRPKATLTSGGGDLLSYPNAADVVITEDLVGKDSVGIEMQPDAIAFGTLAADTALTSIGFPDDNDEFDLDSPTEGFASIPEAIEDIRQGKMVLVVDDEDRENEGDLIMAAQLATPEAMAFIVKHGTGIVCVSMKEEDLERLELPLMVSSKDNDEKLRTAFTVTVDAKQGTTTGVSAQDRATTVLALASRDSKPDDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGLDPVAVLCEVVDDDGSMARLPKLREFAKCENLKIVSIADLIRYRRKRDKLIDRAGAAVIPTMWGPFTAYCYRSHLDGIEHIAMVKGDIRDGQDVLVRVHSECLTGDIFGSARCDCGNQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYKLQDAGRDTVEANEELGLPVDSREYGIGAQILRDLGVRSMKLMTNNPSKYVGLKGYGLTISGRIPLLTLITKENRRYLETKSVKMGHVYGLDFNGKLSSYDNGNGKTSTGDSNDVTGS 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00727 561 Hamap GTP cyclohydrolase-2 [ribA]. 338 534 IPR000926 GO:0003935|GO:0009231
Bach11g00727 561 FunFam Riboflavin biosynthesis protein RibBA 340 511 - -
Bach11g00727 561 SUPERFAMILY YrdC/RibB 134 336 IPR017945 -
Bach11g00727 561 Pfam GTP cyclohydrolase II 345 508 IPR032677 -
Bach11g00727 561 NCBIfam 3,4-dihydroxy-2-butanone-4-phosphate synthase 136 333 IPR000422 GO:0008686|GO:0009231
Bach11g00727 561 SUPERFAMILY RibA-like 338 509 IPR036144 -
Bach11g00727 561 FunFam Bifunctional riboflavin biosynthesis protein RIBA 1 chloroplastic 126 339 - -
Bach11g00727 561 NCBIfam GTP cyclohydrolase II 345 531 IPR000926 GO:0003935|GO:0009231
Bach11g00727 561 Gene3D DHBP synthase 125 339 - -
Bach11g00727 561 CDD GTP_cyclohydro2 339 530 IPR000926 GO:0003935|GO:0009231
Bach11g00727 561 Hamap 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 133 337 IPR000422 GO:0008686|GO:0009231
Bach11g00727 561 Gene3D GTP cyclohydrolase II 340 511 IPR036144 -
Bach11g00727 561 PANTHER GTP CYCLOHYDROLASE II-RELATED 133 533 - -
Bach11g00727 561 Pfam 3,4-dihydroxy-2-butanone 4-phosphate synthase 140 332 IPR000422 GO:0008686|GO:0009231
Bach11g00727 561 Hamap Riboflavin biosynthesis protein RibBA [ribBA]. 134 530 IPR016299 GO:0009231
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00727 Bach-Chr11 5539889 5543887 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00727 K14652 - qsa:O6P43_031637 894.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach11g00727 11 5539889 5543887 Bach7g00867 7 19860161 19864528 BWGD
Bach11g00727 11 5539889 5543887 Bach11g00727 11 5539889 5543887 ECH