Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach11g00292 ATGCCAAAACTTGGTCTATTCCTTGTTTGGTTTTCTCTGTTTCAGACAAGCAATTTGCTGGTGCAAGCCCGCACTTCACCATCAGACATTTCAGGTCTCGAAGCTTTGAAAGCTTCAATTAAACCCTCTTCTATAAAACCCTGGTCATGCCTAGGATCCTGGAACTTCAGCGTTGATCCCTGTTCAGTCCCACGCCGCAACTACTTCACCTGCGGCCTCACCTGCACCCCTGACTCCACTCGGATCAACCAAATAACCCTGGACCCCGCTGGTTACTCGGGAACACTCTCCCCTCTTGTTTCTCAACTCACCCAACTCATCACCCTTGACCTTGCTGACAACTCCTTCTTCGGCCGTATTCCTTCTTCCATCTCTTCACTTTCGAACCTCCAAACATTAACTCTCCGATCCAATTTCTTCTCTGGCGCAATCCCTTCCTCCATAACCAGCCTCAAGTCCCTGGAATCTCTGGACCTTGCGCACAATTCCCTATCGGGGTCTATCCCAAACTCCATGAATTTCCTCACCAGCCTGAGAAGAATTGATCTGAGCTTCAACAAATTAACTGGGTCAATCCCGAAACTCTCACCCAACCTACTAGAACTTGCAGCCAAGGGGAATTCTTTATCCGGGCCTCTCTATAAATCCTCCTTCGACGGGTTGAACCAATTGGAGGTGGTGGAGCTCAGTGAGAACGCCTTCTCCGGAGCACTTGAAAGCTGGTTCTTCCTCTTACCGTCCCTGCAACAAGTAGATTTGGCCAATAACAGCTTCACTCGTATCGAGATCTCGAAACCCACGGGTGGTAACAGTAACTTGATTGCTGTAAATTTGGGTTTCAACAAAATTCAGGGATACTTGCCCGTTAATCTCGCTGCATATCCTCTGCTTTCGTTTCTGTCAATTCGTTATAATGCAGTACGTGGCACCATCCCATTACTGTACAGTCAGAGTAAGTCAATGAAAAGGCTATTCTTAGATGGAAATTTCCTGATAGGGAAGCCACCGGCAGGGTTCTTCGCTGGCGGTGGATCAGTTTCCGGCAGCTTAGGGGACAATTGCCTGCAGAATTGCCCAGGATCATCACAGCTGTGCACGCCTGCCCAGAAACCCAGCTCAGTTTGCAAGGAAGCGTACCGTGGAAAACCAGCAGCATCGGTTAAAAAACAAAAAAAATAA 1179 0.4826 MPKLGLFLVWFSLFQTSNLLVQARTSPSDISGLEALKASIKPSSIKPWSCLGSWNFSVDPCSVPRRNYFTCGLTCTPDSTRINQITLDPAGYSGTLSPLVSQLTQLITLDLADNSFFGRIPSSISSLSNLQTLTLRSNFFSGAIPSSITSLKSLESLDLAHNSLSGSIPNSMNFLTSLRRIDLSFNKLTGSIPKLSPNLLELAAKGNSLSGPLYKSSFDGLNQLEVVELSENAFSGALESWFFLLPSLQQVDLANNSFTRIEISKPTGGNSNLIAVNLGFNKIQGYLPVNLAAYPLLSFLSIRYNAVRGTIPLLYSQSKSMKRLFLDGNFLIGKPPAGFFAGGGSVSGSLGDNCLQNCPGSSQLCTPAQKPSSVCKEAYRGKPAASVKKQKK 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach11g00292 392 FunFam Nuclear pore complex protein NUP107 26 194 - -
Bach11g00292 392 Pfam Leucine rich repeat 128 188 IPR001611 GO:0005515
Bach11g00292 392 Pfam Leucine Rich Repeat 106 127 IPR001611 GO:0005515
Bach11g00292 392 PRINTS Leucine-rich repeat signature 154 167 - -
Bach11g00292 392 PRINTS Leucine-rich repeat signature 175 188 - -
Bach11g00292 392 ProSiteProfiles Leucine-rich repeat profile. 153 175 IPR001611 GO:0005515
Bach11g00292 392 Gene3D Ribonuclease Inhibitor 29 196 IPR032675 -
Bach11g00292 392 SMART LRR_typ_2 221 244 IPR003591 -
Bach11g00292 392 SMART LRR_typ_2 175 202 IPR003591 -
Bach11g00292 392 SMART LRR_typ_2 151 174 IPR003591 -
Bach11g00292 392 SMART LRR_typ_2 103 127 IPR003591 -
Bach11g00292 392 SMART LRR_typ_2 245 266 IPR003591 -
Bach11g00292 392 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 9 377 - -
Bach11g00292 392 SUPERFAMILY L domain-like 70 336 - -
Bach11g00292 392 Gene3D Ribonuclease Inhibitor 197 365 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach11g00292 Bach-Chr11 2016194 2017372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach11g00292 75 339 Receptor kinase-like Gene Family AT5G46330 26.990 1.42e-15 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach11g00292 - - qsa:O6P43_031064 572.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach11g00292 11 2016194 2017372 Bach11g00292 11 2016194 2017372 ECH