Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g01166 ATGACAAAACTCGAAACCGATCAGGTGAAGCAGCTCAGAGACATATTCAGACGCTTTGACCTGGACTCGGACGGCAGCCTGACCCTTCTAGAGCTCGCGGCCCTCCTCCGGGCCCTCGGCATTAAACCGGCGAGCGGCGACGAACTCTTCGCCCTGCTCTCCAGCATGGACGAGAATGGCAATGGTTACATTGAGTTTGAGGAGCTTATGCATGCCATTTTACCTGACATGAACGAAGAGGTGCTGGTGAACCAGGAACAGCTCTTGGAGGTATTCAGGTCCTTCGACAGGGACGGCAACGGCTACATCACCGCCTCGGAGCTCGCCGGCTCCATGGCCAAGATGGGTCACCCCTTGACCTACCGCGAGCTTGCTGATATGATGAGAGAGGCTGATAGCAATGGTGATGGGGTTATAAGCTTCAATGAGTTTACAAACATGATGGCTAAATCTGCTGCTGAATTTCTTGGCCTCAAGGTTGCTTAA 486 0.5329 MTKLETDQVKQLRDIFRRFDLDSDGSLTLLELAALLRALGIKPASGDELFALLSSMDENGNGYIEFEELMHAILPDMNEEVLVNQEQLLEVFRSFDRDGNGYITASELAGSMAKMGHPLTYRELADMMREADSNGDGVISFNEFTNMMAKSAAEFLGLKVA 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g01166 161 ProSiteProfiles EF-hand calcium-binding domain profile. 83 118 IPR002048 GO:0005509
Bach10g01166 161 PANTHER CALCIUM BINDING PROTEIN 84 148 - -
Bach10g01166 161 ProSitePatterns EF-hand calcium-binding domain. 132 144 IPR018247 -
Bach10g01166 161 ProSitePatterns EF-hand calcium-binding domain. 20 32 IPR018247 -
Bach10g01166 161 ProSiteProfiles EF-hand calcium-binding domain profile. 119 154 IPR002048 GO:0005509
Bach10g01166 161 Pfam EF-hand domain pair 10 73 IPR002048 GO:0005509
Bach10g01166 161 Pfam EF-hand domain pair 86 148 IPR002048 GO:0005509
Bach10g01166 161 ProSitePatterns EF-hand calcium-binding domain. 96 108 IPR018247 -
Bach10g01166 161 Gene3D - 79 157 - -
Bach10g01166 161 SUPERFAMILY EF-hand 2 150 IPR011992 -
Bach10g01166 161 CDD EFh 87 149 IPR002048 GO:0005509
Bach10g01166 161 CDD EFh 48 109 IPR002048 GO:0005509
Bach10g01166 161 ProSiteProfiles EF-hand calcium-binding domain profile. 44 79 IPR002048 GO:0005509
Bach10g01166 161 ProSiteProfiles EF-hand calcium-binding domain profile. 7 42 IPR002048 GO:0005509
Bach10g01166 161 SMART efh_1 123 151 IPR002048 GO:0005509
Bach10g01166 161 SMART efh_1 11 39 IPR002048 GO:0005509
Bach10g01166 161 SMART efh_1 48 76 IPR002048 GO:0005509
Bach10g01166 161 SMART efh_1 87 115 IPR002048 GO:0005509
Bach10g01166 161 ProSitePatterns EF-hand calcium-binding domain. 57 69 IPR018247 -
Bach10g01166 161 Gene3D - 1 78 - -
Bach10g01166 161 FunFam Probable calcium-binding protein CML16 1 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g01166 Bach-Chr10 8798045 8798530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g01166 6 161 EF-hand Containing Proteins AT3G25600 76.282 1.55e-85 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g01166 K13448 - gmx:100797705 258.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g01166 10 8798045 8798530 Bach10g01166 10 8798045 8798530 ECH