Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00923 ATGAGTGGGTTCTGTTTCAGAGGCTTCATATTTACACTTCTCATTGCATTTCTTGTTTGGTCTTTCAATTTTGAATCCTGCATTGCAAGAAGAGGGAAGCATTGGACGCAGAGCAGAGGAATCTCTGCTTCTCTGTATAAGAAGAAAGGACCGTATAAAAGCATTCCACCATCACCACCACTTCCAGAGCCACCAAAAGCCCCTCCAACTCCTAGCAAAGGTGGCCATTCTACCATCTTTAATGTGCTAGATTTTGGAGCTAAGGGTGATGGAAGTTCTGATGATACAAAGGCATTCCAAGCCGCATGGGCAGAGGCTTGTAAGGTAGAGGCATCAACCATGCTCGTCCCAGAAAACTACGTCTTCTATGTGGGACCCATTTCATTCTCAGGACCGTATTGTCAGCACAACATTGTTTTTCAGCTTGATGGTACAATTGTTGCTCCTACGAATCCTAAGGTTTGGGGCAGAGGGCTTCTACAGTGGCTGGATTTCACAAAGCTAGTGCAGATTACCATTCAAGGAAAAGGTGTCATTGACGGTAGAGGTTCTGTCTGGTGGCAAGACAGTCCGTATGATGACCCCATAGATGATGAAGAGGAGCTCATAGTCCCATTAAATAAAACAGCTGGACGGCCACCACTGCCGATTCAAAGTGAGATGGCAGGGAGAATGCCAGGCATCAAACCAACTGCACTGCGGTTCTATGGGAGTTTAGGTGCAACAGTCACGGGCATAACAATTCAAAATAGTCCACAATTCCACCTCAAGTTTGACAACTGTGATGGAGTGCTGGTTCGTGATGTGACCATATCATCCCCCGGTGACAGCCCCAACACTGATGGAATTCACCTTCAGAACTCCAAAGAAGTACTGATTCACAGCAGCAGTTTAGCTTGTGGAGATGACTGTATTTCTATACAAACTGGATGCTCAAATGTATTTGTGCACAACGTCGACTGTGGGCCAGGGCATGGAATCAGCATTGGAAGTCTAGGAAAGGATAACACCAAAGCCTGTGTCTCAAACATCACTGTCCGAGATGTCAACATGCACAACACAATGAATGGTGTCAGAATTAAAACATGGCAGGGAGGATCAGGCTCTGTGCAGGGTGTGCTGTTTTCTAATATACAAGTTTCTGAAGTTCAACGTCCAATTGTGATTGATCAATTCTATTGTGATAAAAGAACATGCCCAAATCAGACATCAGCTGTGGCTCTCCAAGGAATCAATTATGAACAAATAAGAGGGACCTACACAGTTAAACCAGTACACTTTGCTTGTAGTGATAGCCTACCATGTGTAGGTGTTTCTTTAACCTCCATTGAGCTAAAACCACTTCAAGAAAAATATCACCTATATGATCCATTTTGCTGGCAGACTTATGGTGAATTAAAAACTCCCACAGTCCCTCCAATTGCTTGTCTACAGATTGGGAAGCCATCAGGCAATCATGTTCACACTGATCATGATTTGTGTTGA 1485 0.4424 MSGFCFRGFIFTLLIAFLVWSFNFESCIARRGKHWTQSRGISASLYKKKGPYKSIPPSPPLPEPPKAPPTPSKGGHSTIFNVLDFGAKGDGSSDDTKAFQAAWAEACKVEASTMLVPENYVFYVGPISFSGPYCQHNIVFQLDGTIVAPTNPKVWGRGLLQWLDFTKLVQITIQGKGVIDGRGSVWWQDSPYDDPIDDEEELIVPLNKTAGRPPLPIQSEMAGRMPGIKPTALRFYGSLGATVTGITIQNSPQFHLKFDNCDGVLVRDVTISSPGDSPNTDGIHLQNSKEVLIHSSSLACGDDCISIQTGCSNVFVHNVDCGPGHGISIGSLGKDNTKACVSNITVRDVNMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVQRPIVIDQFYCDKRTCPNQTSAVALQGINYEQIRGTYTVKPVHFACSDSLPCVGVSLTSIELKPLQEKYHLYDPFCWQTYGELKTPTVPPIACLQIGKPSGNHVHTDHDLC 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00923 494 PANTHER - 78 464 - -
Bach10g00923 494 FunFam polygalacturonase At1g48100 68 479 - -
Bach10g00923 494 SMART pbh1 311 331 IPR006626 -
Bach10g00923 494 SMART pbh1 261 287 IPR006626 -
Bach10g00923 494 SMART pbh1 288 309 IPR006626 -
Bach10g00923 494 SMART pbh1 238 258 IPR006626 -
Bach10g00923 494 SMART pbh1 341 362 IPR006626 -
Bach10g00923 494 SMART pbh1 370 391 IPR006626 -
Bach10g00923 494 MobiDBLite consensus disorder prediction 49 74 - -
Bach10g00923 494 MobiDBLite consensus disorder prediction 53 71 - -
Bach10g00923 494 Pfam Glycosyl hydrolases family 28 229 446 IPR000743 GO:0004650|GO:0005975
Bach10g00923 494 Pfam Glycosyl hydrolases family 28 109 190 IPR000743 GO:0004650|GO:0005975
Bach10g00923 494 ProSitePatterns Polygalacturonase active site. 318 331 IPR000743 GO:0004650|GO:0005975
Bach10g00923 494 Gene3D - 70 480 IPR012334 -
Bach10g00923 494 SUPERFAMILY Pectin lyase-like 77 492 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00923 Bach-Chr10 6544953 6548635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00923 4 494 Glycoside Hydrolase AT1G60590 63.415 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00923 - - gmx:100783813 824.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g00923 10 6544953 6548635 Bach10g00923 10 6544953 6548635 ECH