Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00854 ATGGCTTTCCGTGGCACTTTCGTTAAGCCAAACAAGTCTCTCCCTCCATTCCACAGAACTCCAGCTCCAAACCATGGCTGCAGAAAACAGTTCTGTTTGAGAGCTTCAGCAACTAGCTCAGATGGATGGAAGATCAATTACTCGGGGGAAAAACCAGCAACACCATTGCTAGATACTGTCAATTACCCTGTTCATATGAAGAATCTCTCTACACAGGATCTTGATCAACTTGCAGCAGAACTAAGGGCAGAAATAGTATACTCGGTATCAAATACTGGTGGCCATCTTAGCTCAAGCTTAGGGGTAGTGGAGTTAGCAGTTGCTCTGCATCATGTTTTCAACACCCCTGATGACAAAATCATATGGGATGTGGGCCACCAGGCATACCCACACAAGATTCTCACTGGTCGAAGATCCAGAATGCACACCATTAGGAAAACTTCAGGGCTAGCCGGATTTCCTAAAAGGGCCGAGAGCGTTCATGATGCTTTTGGGACAGGGCACAGTTCTACCAGTATATCTGCTGCCCTCGGCATGGCAGTTGCAAGGGATCTATTGGGGAATAACAACAACGTCATTTCGGTGATTGGAGATGGGGCAATGACTGCAGGTCAAGCATACGAAGCCATGAACAATGCAGGATACCTTGATGCCAACATGATAGTTATACTTAATGACAACAAGCAAGTCTCTTTACCAACTGCTACACTTGATGGCCCTACAACTCCAGTTGGAGCTCTCAGTAGTGCTTTAAGCAAGATTCAAGCAAGCACCAAATTCCGCAAACTCAGAGAAGCAGCGAAGAGCATCACAAAACAAATGGGAGAGCAAACACATCAAGTTGCAGCAAAACTAGACGAGTATGCAAGAGGTATGATCAGCGCTTCAGGGTCTACACTTTTTGAGGAGCTTGGTTTATATTACATTGGTCCGGTGGATGGTCATAACATTGAAGATCTAGTCACCATTTTCCGAAAAGTGAAAGCAATGCCGGCCCCAGGTCCAGTTTTGATTCACATTGTGACAGAGAAAGGAAAGGGATACCCCCCAGCAGAAGCAGCGGCTGACAAAATGCATGGTGTTGTCAAGTTTGACCCAAAAACAGGCCAGCAGTTTAAGCCAAAATCCTCAACCCTTTCGTATACTTGGTACTTTGCTGAATCTTTGATAAAGGAAGCCGAAGTGGACAACAAGATAGTAGCCATTCATGCAGCAATGGGCGGCGGGACTGGTCTAAATTATTTTCAGAACAAGTTTCCAGACCGCTGTTTTGATGTGGGGATAGCTGAGCAACATGCTGTCACATTTGCAGCTGGGTTAGCTGCAGAGGGTCTCAAGCCATTCTGTGCCATCTATTCATCCTTCCTGCAGCGCGGATATGATCAGGTGGTACATGACGTAGATCTTCAGAAACTACCTGTCCGTTTTGCTATGGATAGAGCTGGTTTGGTTGGTGCAGATGGACCAACCCACTGTGGAGCATTTGATATCACATACATGGCTTGCTTGCCCAACATGGTGGTCATGGCGCCATCTGATGAAGCTGAACTTATGCACATGATTGCAACAGCAGCAGCCATAGATGACAGACCAAGCTGCTTTAGATTTCCGAGGGGCAATGGAATTGGAACAGTTCTGCCTCCTAATAACAAAGGAACCCCACTTGAGATAGGAAAGGGCAGAATACTAATTGAAGGCAGCAGAGTTGCTCTTCTGGGATATGGTTCTGTAGTTCAACAATGCCTGCAAGCAGCAAAAATCCTCAAAACACACGACATTTCTGTCACGGTTGCTGATGCTAGGTTTTGCAAACCTCTGGACATTGATCTAATTAAGCGACTAGCCAAGGAACACGAAATTCTCATTACAGTTGAAGAGGGTTCTATTGGAGGTTTCGGATCTCATGTATCACAATACCTAAGCTTATCCAGTATCCTGGATGGACCTCTCAAGTGGAGAGCAATGATGCTTCCTGATAGATACATTGAGCATGGGTCACCCCAAGATCAGCTTGAAGAAGCAGGACTTTCCTCAAATAATATTATTGCAACAGTCTTGTCCGTTTTAGGGAGGCCAAAAGACACTTTTCTGTTCAAGTAA 2100 0.4552 MAFRGTFVKPNKSLPPFHRTPAPNHGCRKQFCLRASATSSDGWKINYSGEKPATPLLDTVNYPVHMKNLSTQDLDQLAAELRAEIVYSVSNTGGHLSSSLGVVELAVALHHVFNTPDDKIIWDVGHQAYPHKILTGRRSRMHTIRKTSGLAGFPKRAESVHDAFGTGHSSTSISAALGMAVARDLLGNNNNVISVIGDGAMTAGQAYEAMNNAGYLDANMIVILNDNKQVSLPTATLDGPTTPVGALSSALSKIQASTKFRKLREAAKSITKQMGEQTHQVAAKLDEYARGMISASGSTLFEELGLYYIGPVDGHNIEDLVTIFRKVKAMPAPGPVLIHIVTEKGKGYPPAEAAADKMHGVVKFDPKTGQQFKPKSSTLSYTWYFAESLIKEAEVDNKIVAIHAAMGGGTGLNYFQNKFPDRCFDVGIAEQHAVTFAAGLAAEGLKPFCAIYSSFLQRGYDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDITYMACLPNMVVMAPSDEAELMHMIATAAAIDDRPSCFRFPRGNGIGTVLPPNNKGTPLEIGKGRILIEGSRVALLGYGSVVQQCLQAAKILKTHDISVTVADARFCKPLDIDLIKRLAKEHEILITVEEGSIGGFGSHVSQYLSLSSILDGPLKWRAMMLPDRYIEHGSPQDQLEEAGLSSNNIIATVLSVLGRPKDTFLFK 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00854 699 CDD TPP_PYR_DXS_TK_like 385 538 - -
Bach10g00854 699 SMART Transket_pyr_3 379 544 IPR005475 -
Bach10g00854 699 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 376 567 IPR029061 -
Bach10g00854 699 MobiDBLite consensus disorder prediction 1 20 - -
Bach10g00854 699 FunFam 1-deoxy-D-xylulose-5-phosphate synthase 558 690 - -
Bach10g00854 699 PANTHER 1-D-DEOXYXYLULOSE 5-PHOSPHATE SYNTHASE-RELATED 39 694 IPR005477 GO:0008661|GO:0016114
Bach10g00854 699 Pfam 1-deoxy-D-xylulose-5-phosphate synthase 57 342 IPR005477 GO:0008661|GO:0016114
Bach10g00854 699 Pfam Transketolase, C-terminal domain 558 681 IPR033248 -
Bach10g00854 699 NCBIfam 1-deoxy-D-xylulose-5-phosphate synthase 59 689 IPR005477 GO:0008661|GO:0016114
Bach10g00854 699 ProSitePatterns Transketolase signature 2. 485 501 IPR020826 -
Bach10g00854 699 SUPERFAMILY TK C-terminal domain-like 553 689 IPR009014 GO:0003824
Bach10g00854 699 Gene3D - 50 351 - -
Bach10g00854 699 Pfam Transketolase, pyrimidine binding domain 379 540 IPR005475 -
Bach10g00854 699 Gene3D - 558 690 IPR009014 GO:0003824
Bach10g00854 699 FunFam 1-deoxy-D-xylulose-5-phosphate synthase 378 546 - -
Bach10g00854 699 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 54 441 IPR029061 -
Bach10g00854 699 Gene3D - 379 545 - -
Bach10g00854 699 CDD TPP_DXS 93 348 IPR005477 GO:0008661|GO:0016114
Bach10g00854 699 Hamap 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 56 690 IPR005477 GO:0008661|GO:0016114
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00854 Bach-Chr10 6045360 6048524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00854 421 637 Acyl Lipid Metabolism Gene Families AT1G55510 24.464 3.14e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00854 K01662 - qsa:O6P43_025201 1226.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g00854 10 6045360 6048524 Bach10g00854 10 6045360 6048524 ECH