Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00691 CTCAATTTTTCTGAGATGAGAGCTGCATAAGCCACACCCTTCTTCAAACTTCAACGTTGCATCGGCGTTTGATTTGATGCACTACCCTTCAGCTCGTGGAACCTAGCTGCTTTCAATAGGTATAGATCATTTCGTAGAATCTAGAAGGAGACACATCAACCATGGCAGACAAAGGAAGCCTAGAATATCATCCAAGCTCGCTAACAGCTCCCTTCGTTCTTATGATCGTTGTCGCTTTTCAGTTCGTTACAAAGTCGTTGAAAATCAAGAAGAAGAACGCAACCAAAACTGAAAAAGAAATTCAGTTGCGTGCAGAAATAAAAAATCTCTTGAAGGAGGCAAGCTCCCTGACACAGCCGTCAACCTTCGCACAAGCCGCAAAACTTAGAAGACAAGCAGCTGCTAAGGAGAAGGAACTTTCTAATTATCACGATTTACATGGCAAAGAGATAAACATGTCATATGATGCATATTTGAAAGCTATATTCATCTCAAAGGTTTTCACATTTGCAGTGCTGATTTTCTGGTTTTGGAAGGCTCCTGTGGCTATTGTATCTCAGCAACTTGTACAACCTTTTGGGAAATTACTATCTTTTCGGTCTGGAGGGGTTCAAAACGACATGGTTATGGTCGGGATAATTCCTTGGTTAATGGTATCTACCAGGGCCAGCGAAGCACCATTTGTACCTTCGGTCAGCAGCTTCGGTACCATGTACGGATCTAGAGGGGCAATGTTGGGAAGCGGGGGGGTTTCGGACGGGTACGAGGTTGGCTCAAAGAGACAAAGAATGATGGAATCCAATCCATACTTCGCAGTGAGCAGTGGCACAGGCAACTTTCAACCTTATGGATACGCTGGTGGCTTCCAGCCCCCTCCTTTTCCTGTTGTCCGTCTCAGGGGCCTTCCCTTCAATTGCACTGACATTGACATCTTCAAGTTCTTTGCTGGACTGGACATCGTGGATGTGTTACTGGTCAACAAGAGTGGACGGTTTTCTGGAGAGACCTTTGTTGTCTTTGCTGGAGCAATGCAGGTTGAGTTTGCTTTGCAGAGAGACAGACAGAACATGGGGCGCAGATATGTGGAAGTCTTCAGATGTAAGAAGCAGGATTATTATAATGCTGTTGCTGCTGAGGTAAATTATGAAGGAATATATGATAATGACTACCATGGAAGCCCTCCTCCATCTCGGTCCAAGAGGTTCAGTGATAAGGAGCAAATGGAATACACTGAGATATTGAAGATGCGTGGACTGCCATTTGCTGTGACCAAATCTGAAATTGTTGAATTCTTTGGAGATTTCCAGCTGATAGAAGATAGGATACATATTGCATGTCGCCCAGATGGTAAAGCGACGGGAGAAGCATATGTGGAGTTTGTTTCTGCTGATGAGGCTAAGAGTGCAATGTCTAAGGATAAAATGACAATTGGGTCAAGGTATGTGGAGCTGTTTCCTTCAACGCCTGATGAAGCTAGACGGGCAGAGTCAAGATCAAGGCAGTAA 1505 0.4452 MADKGSLEYHPSSLTAPFVLMIVVAFQFVTKSLKIKKKNATKTEKEIQLRAEIKNLLKEASSLTQPSTFAQAAKLRRQAAAKEKELSNYHDLHGKEINMSYDAYLKAIFISKVFTFAVLIFWFWKAPVAIVSQQLVQPFGKLLSFRSGGVQNDMVMVGIIPWLMVSTRASEAPFVPSVSSFGTMYGSRGAMLGSGGVSDGYEVGSKRQRMMESNPYFAVSSGTGNFQPYGYAGGFQPPPFPVVRLRGLPFNCTDIDIFKFFAGLDIVDVLLVNKSGRFSGETFVVFAGAMQVEFALQRDRQNMGRRYVEVFRCKKQDYYNAVAAEVNYEGIYDNDYHGSPPPSRSKRFSDKEQMEYTEILKMRGLPFAVTKSEIVEFFGDFQLIEDRIHIACRPDGKATGEAYVEFVSADEAKSAMSKDKMTIGSRYVELFPSTPDEARRAESRSRQ 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00691 447 CDD RRM_hnRNPH_ESRPs_RBM12_like 242 311 - -
Bach10g00691 447 CDD RRM_hnRNPH_ESRPs_RBM12_like 359 431 - -
Bach10g00691 447 SUPERFAMILY RNA-binding domain, RBD 233 320 IPR035979 GO:0003676
Bach10g00691 447 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED 236 439 - -
Bach10g00691 447 Coils Coil 72 92 - -
Bach10g00691 447 SUPERFAMILY RNA-binding domain, RBD 357 444 IPR035979 GO:0003676
Bach10g00691 447 Gene3D - 342 447 IPR012677 -
Bach10g00691 447 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 362 428 IPR000504 GO:0003723
Bach10g00691 447 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 358 435 IPR000504 GO:0003723
Bach10g00691 447 SMART rrm1_1 359 431 IPR000504 GO:0003723
Bach10g00691 447 SMART rrm1_1 242 311 IPR000504 GO:0003723
Bach10g00691 447 Pfam CHD5-like protein 29 165 IPR028945 GO:0071816
Bach10g00691 447 Gene3D - 240 324 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00691 Bach-Chr10 4864747 4871483 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00691 K12898 - jre:109014134 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g00691 10 4864747 4871483 Bach10g00691 10 4864747 4871483 ECH