Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00620 ATGGCCGCTTCTACTCGATTTGCCACGGTTTTGGTGTCTTTGTTCATCTTCCAATTCTCATTAGGTTCGTATTCAACAACATTCACAATTGTAAACCAGTGCAGCTACAGAGTTTGGCCAGGCATTTTGTCGGGCGCTGGCACTGCACAACTCTACACCACAGGCTTCGCCCTTCAACCGGGCGAGTCCAATGCTCTGTCTGTGCCCACGGCCTGGTCCGGTCGCTTATGGGGTCGAACGCTTTGCTCCCAAGACTCCACCGGAAATTTCACCTGCGTCACCGGTGATTGCGGATCCTCCACCTTGGAATGCGCCGGCCGCTGTGCTACTCCGCCAGCTACACTAGCAGAGTTCACGCTTAACGGAGCCGGTGGACTCGACTTCTACGACGTTAGCCTCGTAGACGGGTACAACCTTCCGATGACGGTGGAGCCCCATGGTGGAACACCCGGCGCTGGGAATTGTACCACGACTGGGTGCGTGGTGGATTTGAACGAGAGTTGTCCTACGGAGTTGAAGGTTATGTCGAGCGGTGATGGGCGAGAGGGCGTGGCTTGTAAAAGCGCGTGTGAGGCCTTCCAGGCTCCACAGTATTGCTGCAGTGGCGCTTACGCGACTCCAGACACTTGCAAGCCCAGCACTTACTCCCAGCTTTTCAAATCTGCCTGCCCACGCGCTTACAGCTACGCTTATGACGATGGCAGCAGCACCTTCACTTGTGCCTCCGCAGATTACCTCATCACTTTCTGCCCCACCTCCCCCAAAAGGATCAGAAGCTCACGTGATTTTGTCAGGGAAACTAACTATAATGGCTCTTGTGATGGCGATTTGGCGTTTGTGGCAACAACAGCTTTAAGCCGGAGGAGTCTCAAAGACTCCGCTAACTGCCAATGCCACATACTTCAAATATTTGGTGGGCTTGATCGGAGTTTTGTCCGATGGGGCAATGGCAGAGTCTCTATCGAAATCCAAGCTATGGTTGAAGCTTGA 990 0.5374 MAASTRFATVLVSLFIFQFSLGSYSTTFTIVNQCSYRVWPGILSGAGTAQLYTTGFALQPGESNALSVPTAWSGRLWGRTLCSQDSTGNFTCVTGDCGSSTLECAGRCATPPATLAEFTLNGAGGLDFYDVSLVDGYNLPMTVEPHGGTPGAGNCTTTGCVVDLNESCPTELKVMSSGDGREGVACKSACEAFQAPQYCCSGAYATPDTCKPSTYSQLFKSACPRAYSYAYDDGSSTFTCASADYLITFCPTSPKRIRSSRDFVRETNYNGSCDGDLAFVATTALSRRSLKDSANCQCHILQIFGGLDRSFVRWGNGRVSIEIQAMVEA 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00620 329 CDD TLP-PA 27 250 - -
Bach10g00620 329 SMART tha2 28 251 IPR001938 -
Bach10g00620 329 FunFam THAUMATIN-LIKE PROTEIN 1 26 251 - -
Bach10g00620 329 Pfam Thaumatin family 32 251 IPR001938 -
Bach10g00620 329 Gene3D Thaumatin 26 251 IPR037176 -
Bach10g00620 329 ProSiteProfiles Thaumatin family profile. 25 253 IPR001938 -
Bach10g00620 329 PANTHER OS03G0233200 PROTEIN 15 251 IPR001938 -
Bach10g00620 329 SUPERFAMILY Osmotin, thaumatin-like protein 26 251 IPR037176 -
Bach10g00620 329 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Bach10g00620 329 PRINTS Pathogenesis-related protein signature 241 250 IPR001938 -
Bach10g00620 329 PRINTS Pathogenesis-related protein signature 127 143 IPR001938 -
Bach10g00620 329 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00620 Bach-Chr10 4411735 4413081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00620 7 268 Receptor kinase-like Gene Family AT5G38280 50.189 1.16e-85 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00620 - - gmx:100807106 428.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g00620 10 4411735 4413081 Bach10g00620 10 4411735 4413081 ECH