Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00618 ATGGCAGCTGCGGTAACTGCTGCAGTCTCCTTTCCATCCACCAAATCCTCCTCTCTATCAAGCAGGACCTCTATCGTTAAACCAGAGAGAGTAGTGTTCAAAAAGGTTCAACTGCAGTTCAGAGATGTTTTTAGCACTAGGAAGGTAGGTTTCGTTAGAGCCCAAGTCACCACTGACACTGAGGCACCTGCCAAAGTTAAGAAGGAATCCAAGAAACAAGAGGAGGGTGTGACTGTAAACAAGTTCAAACCCAAGGAGCCATACATTGGCAGATGCCTGCTCAACACTAAGATCACTGGAGATGATGCTCCTGGAGAAACTTGGCACATGGTCTTCAGCACCGAGGGAGAGGTTCCTTACAGAGAAGGACAATCAGTTGGAGTAATCGCAGATGGTGTTGACAAGAATGGGAAGCCTCACAAGCTGAGATTATACTCAATTGCCAGCAGTGCCCTTGGTGACTTTGGAGACTCCAAAACTGTTTCTCTGTGCGTGAAACGTCTTGTGTACACAAATGAGAATGGAGAACTTGTCAAGGGAGTTTGCTCAAATTTCTTGTGTGACTTGAAGCCTGGAGAAGAAGTAAAGATTACAGGACCTGTTGGGAAAGAAATGCTTATGCCAAAAGATCCCACTGCCACCATCATCATGCTTGGAACTGGAACTGGGATTGCTCCTTTCCGCGCATTTTTGTGGAAAATGTTCTTTGAGAAGCATGATGACTACAAGTTCAATGGTTTAGCATGGCTCTTCTTGGGTGTCCCCACAGGCAGCTCATTGCTTTACAAGGAGGAATTCGAAAAGATGAAGGAGAAGGCACCTGACAACTTTAGGCTCGACTTTGCTGTCAGCAGAGAGCAAACCAATGAAAAGGGAGAGAAGATGTACATCCAAACCAGAATGGCTCAATATGCAGAAGAGTTATGGGATCTACTCAAGAAAGATAATACCTATGTCTACATGTGTGGACTGAAAGGCATGGAAAAGGGAATTGATGACATAATGGTATCATTGGCTGCTAAAGATGGCATCGATTGGATTGATTACAAGAAACAACTGAAGAAATCAGAGCAATGGAATGTTGAAGTCTACTAA 1095 0.4438 MAAAVTAAVSFPSTKSSSLSSRTSIVKPERVVFKKVQLQFRDVFSTRKVGFVRAQVTTDTEAPAKVKKESKKQEEGVTVNKFKPKEPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYREGQSVGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGELVKGVCSNFLCDLKPGEEVKITGPVGKEMLMPKDPTATIIMLGTGTGIAPFRAFLWKMFFEKHDDYKFNGLAWLFLGVPTGSSLLYKEEFEKMKEKAPDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAEELWDLLKKDNTYVYMCGLKGMEKGIDDIMVSLAAKDGIDWIDYKKQLKKSEQWNVEVY 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00618 364 Gene3D Translation factors 55 201 - -
Bach10g00618 364 FunFam Ferredoxin--NADP reductase, chloroplastic 69 201 - -
Bach10g00618 364 Gene3D - 202 364 IPR039261 -
Bach10g00618 364 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 205 364 IPR039261 -
Bach10g00618 364 PIRSF FNR-PetH 1 364 IPR035442 GO:0016491
Bach10g00618 364 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 258 269 IPR001709 GO:0016491
Bach10g00618 364 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 246 255 IPR001709 GO:0016491
Bach10g00618 364 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 318 326 IPR001709 GO:0016491
Bach10g00618 364 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 143 150 IPR001709 GO:0016491
Bach10g00618 364 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 294 310 IPR001709 GO:0016491
Bach10g00618 364 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 120 130 IPR001709 GO:0016491
Bach10g00618 364 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 180 189 IPR001709 GO:0016491
Bach10g00618 364 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 216 235 IPR001709 GO:0016491
Bach10g00618 364 PIRSF Frd-NADP+_RD 1 364 IPR015701 GO:0016491
Bach10g00618 364 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 85 207 IPR017927 GO:0016491
Bach10g00618 364 SUPERFAMILY Riboflavin synthase domain-like 63 208 IPR017938 -
Bach10g00618 364 FunFam Ferredoxin--NADP reductase, chloroplastic 202 364 - -
Bach10g00618 364 Pfam Oxidoreductase NAD-binding domain 217 331 IPR001433 GO:0016491
Bach10g00618 364 CDD CYPOR_like_FNR 80 364 - -
Bach10g00618 364 PANTHER - 4 364 IPR015701 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00618 Bach-Chr10 4404366 4406909 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00618 K02641 - gmx:100802032 659.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00744 4 4967748 4969970 Bach10g00618 10 4404366 4406909 BWGD
Bach10g00618 10 4404366 4406909 Bach10g00618 10 4404366 4406909 ECH
Bach10g00618 10 4404366 4406909 Bach4g00744 4 4967748 4969970 ECH