Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00584 ATGGGGTCTCTCTGTTTCCCTATGTTTTTAATTATTGCAGCTTTTGGTTCTGGACCGTTATTCGGAGCAGAATCGAAGACATATTGGGGAGACATTGAGGTTTTGAAAGAGTTCAAGAATGGATTGGACCCAGCTTCTGTGAGTGCTGGTTCATGCATCGCTTCTTGGGACTTCACCCTTGATCCATGCGACAACCTCTTCGGCGAGAAATTCACTTGCGGGTTCAGGTGTGACCTCGTCATTTCTGGGACGAGTCGAGTCACAGAACTCAGCCTGGACCAGGCGGGTTATGCTGGACCCTTGGCCTCCACTTGGAACCTTCCTTTTCTGGAAACTCTGGATTTCTCCAATAACTACTTTTCCGGGAAGATTCCCGAGTCATTATCCAACTTGACTCGGTTGCGTCGACTCGGTTTGTCGAGGAACTCGTTCACCGGTGAGATACCCGCTTCAATTGGGTCCCTTTCTAATCTTGAAGAACTCTACCTGGATAACAACAATTTGCAAGGAACAATCCCAGGGAGTTTCAGTGGCCTCGCAAGCTTGAAGAGGCTTGAAATTCAGTTCAACAAACTCTATGGCCAGCTTCCCGATTTGGGCTCTCTCAAAAACCTTAATTACATGGACGCCAGCGACAATGCCATCAGCGGACAAGTTCCCGCGTCATTGCCCAGTTCTCTACTTGAACTTTTAATTAGAAACAACAGCTTAGGTGGAAGCTTAACATCCCAAAGTTTCAGAAATTTGCAGTATTTGCAAGTAGTTGATTTAAGTTACAACCGAATCGGAGGCTCTGTTCCGTTGGTTTTATTTGAGCTTTCATCGCTGCAGCAATTGACCCTCTCCTTCAACCAGTTCTCGTCCATAGAAACGCCTTATTACAGTGTGGGTTCACAGAGCGGGCTCATTGCGGTTGATATAAGCAACAACGTTCTTCGAGGCTTTTTACCTTCATTCATGGCACTAATGCCAAAGCTCTCATCTTTATCCTTGGAGAACAACAAATTCACGGGTATGATTCCTACCCAGTACGCTTTGAAGACTGTTTTTCCAGAATCTGGAATGTCGCCATTCGAAAGGCTGTTGTTGGGTGGAAATTACTTGTTTGGACTTATACCCAGTCCTCTAATGGCACTGAAACCTGGTTCTGCAAATGTTAGGCTAGTTGACAACTGCTTGTACAGATGCCCACCTATTTTCTTTTTCTGCCTAGGCGGTCAACAAAAAACATGGCAAGAGTGTAAGAGATTCAACCCCGTCATCCCATAG 1269 0.4578 MGSLCFPMFLIIAAFGSGPLFGAESKTYWGDIEVLKEFKNGLDPASVSAGSCIASWDFTLDPCDNLFGEKFTCGFRCDLVISGTSRVTELSLDQAGYAGPLASTWNLPFLETLDFSNNYFSGKIPESLSNLTRLRRLGLSRNSFTGEIPASIGSLSNLEELYLDNNNLQGTIPGSFSGLASLKRLEIQFNKLYGQLPDLGSLKNLNYMDASDNAISGQVPASLPSSLLELLIRNNSLGGSLTSQSFRNLQYLQVVDLSYNRIGGSVPLVLFELSSLQQLTLSFNQFSSIETPYYSVGSQSGLIAVDISNNVLRGFLPSFMALMPKLSSLSLENNKFTGMIPTQYALKTVFPESGMSPFERLLLGGNYLFGLIPSPLMALKPGSANVRLVDNCLYRCPPIFFFCLGGQQKTWQECKRFNPVIP 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00584 422 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 17 414 - -
Bach10g00584 422 SUPERFAMILY L domain-like 50 392 - -
Bach10g00584 422 SMART LRR_typ_2 155 178 IPR003591 -
Bach10g00584 422 SMART LRR_typ_2 202 230 IPR003591 -
Bach10g00584 422 SMART LRR_typ_2 273 297 IPR003591 -
Bach10g00584 422 SMART LRR_typ_2 107 131 IPR003591 -
Bach10g00584 422 SMART LRR_typ_2 323 346 IPR003591 -
Bach10g00584 422 Pfam Leucine rich repeat 226 286 IPR001611 GO:0005515
Bach10g00584 422 Pfam Leucine rich repeat 139 192 IPR001611 GO:0005515
Bach10g00584 422 Gene3D Ribonuclease Inhibitor 198 404 IPR032675 -
Bach10g00584 422 Gene3D Ribonuclease Inhibitor 31 197 IPR032675 -
Bach10g00584 422 Pfam Leucine Rich Repeat 110 131 IPR001611 GO:0005515
Bach10g00584 422 FunFam Nuclear pore complex protein NUP107 29 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00584 Bach-Chr10 4162172 4163440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00584 106 401 Receptor kinase-like Gene Family AT1G17750 31.773 2.06e-24 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00584 - - qsu:112033587 575.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00701 4 4644901 4646175 Bach10g00584 10 4162172 4163440 BWGD
Bach10g00584 10 4162172 4163440 Bach10g00584 10 4162172 4163440 ECH
Bach10g00584 10 4162172 4163440 Bach4g00701 4 4644901 4646175 ECH