Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00572 ATGAGGCATTTTCGATTTATACAGCTATCTCACCTCCGCAAAACCTTTGGCCAAAACCCAACCTTCAATTCTCCATCAATTTTAACTTCATGTGCCATAACCAATCACCAATCAAAGCTCCACCATTATTTAGGTTTCGCGCGTAATTACTCTATTCCTTCACAGGATTCAAAGCCAGTCCAATCCGAGAAGGTCACAGCCATCGTGGATGAGCTAATGGGTCTCACGCTGCTTGAAGTCATGGACCTCGTTGAAGTTATTCGCGAGAAAAAGGGCATAAATGAGATGCCAATTATGATGATGATGATGCCCGGAATGGGAATAGGTGGCTTGAAGGGTGCGCCAAAGGGTGCACCCAAAGGAGAAGAGAAAAAGGCTGAGAAGACCGCTTTTGATTTGAAGCTTGAAGAGTTTGATGCTGCAGCGAAGATCAAGGTAATAAAAGAAGTGAGGACATTTACCAATTTGGGTTTAAAGGAGGCCAAGGATTTGGTGGAGAAGGTGCCCACTCTATTGAAGAAAGGTGTAACCAAAGAGGAAGCAGAGACGATTATTGCCAAGATGAAGGAGGTTGGTGCGAAAGTTTCAATGGAATAA 597 0.4389 MRHFRFIQLSHLRKTFGQNPTFNSPSILTSCAITNHQSKLHHYLGFARNYSIPSQDSKPVQSEKVTAIVDELMGLTLLEVMDLVEVIREKKGINEMPIMMMMMPGMGIGGLKGAPKGAPKGEEKKAEKTAFDLKLEEFDAAAKIKVIKEVRTFTNLGLKEAKDLVEKVPTLLKKGVTKEEAETIIAKMKEVGAKVSME 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00572 198 FunFam 50S ribosomal protein L7/L12 127 198 - -
Bach10g00572 198 Gene3D - 128 197 IPR014719 -
Bach10g00572 198 SUPERFAMILY ClpS-like 127 197 IPR014719 -
Bach10g00572 198 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 31 - -
Bach10g00572 198 Hamap 50S ribosomal protein L7/L12 [rplL]. 62 198 IPR000206 GO:0003735|GO:0005840|GO:0006412
Bach10g00572 198 SUPERFAMILY Ribosomal protein L7/12, oligomerisation (N-terminal) domain 64 132 IPR036235 GO:0003735|GO:0005840|GO:0006412
Bach10g00572 198 PANTHER 39S RIBOSOMAL PROTEIN L12 41 198 IPR000206 GO:0003735|GO:0005840|GO:0006412
Bach10g00572 198 Gene3D Single helix bin 64 127 IPR036235 GO:0003735|GO:0005840|GO:0006412
Bach10g00572 198 CDD Ribosomal_L7_L12 63 197 IPR000206 GO:0003735|GO:0005840|GO:0006412
Bach10g00572 198 NCBIfam 50S ribosomal protein L7/L12 66 197 IPR000206 GO:0003735|GO:0005840|GO:0006412
Bach10g00572 198 Pfam Ribosomal protein L7/L12 dimerisation domain 64 106 IPR008932 GO:0003735|GO:0005840|GO:0006412
Bach10g00572 198 Pfam Ribosomal protein L7/L12 C-terminal domain 131 197 IPR013823 GO:0003735|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00572 Bach-Chr10 4066528 4067124 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00572 K02935 - qsa:O6P43_024810 217.238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g00572 10 4066528 4067124 Bach10g00572 10 4066528 4067124 ECH