Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00570 ATGAAATATAACTGTTGTGTTATGCTTGCAGCTCTTCAAAGACCCGACGTGGTTGGGTCTTTGAAGAAGACGGCGATGAATACCTCAACAAAGTTCAGGAGTTCTATGTCAAGAAAAGGTAGAAGAAGTAGCAAGGTTATGTCCCTTGAAATTGAAGACATCCATGATGAGGAGGAGATGAAAGCTGTTGATGCTTTTCGTCAAGCTCTTGTACTGGAAGAACTATTGCCTGCAAAGCACGATGATTATCATGTGATTCTGAGATTCCTGAAGGCCCGGAAATTTGATATTGAAAAAACAAAGCAAATGTGGTCTGACATGCTCCAATGGAGAAAGGAATTCGGTGCTGACACAATTATGGAGGATTTTGACTTTAAGGAACTCAGTGAAGTCTTGCAATATTACCCCCAAGGGCATCATGGAGTAGATAAAGATGGACGACCTGTGTACATTGAGAGATTAGGCCAAGTAGACCCCACCAAGCTAATGCAAGTAACAACTATGGATCGCTACATTCGATACCATGTTATGGAGTTTGAGAGGACATTCAATATGAAGTTCCCAGCTTGTTCGATTGCTGCGAAGAAGCAAATTGATCAAAGTACAACCATTTTGGATGTGAAAGGAGTGGGGCTTAAGAACTTCAACAAAGCTGCCAGGGAACTCATTACTCGTCTTCAGAAGATTGATGGTGATAATTACCCAGAAACCTTGAATCGCATGTTCATCATCAATGCAGGTTCTGGATTCAGGATGTTGTGGAACACTGTGAAGTCCTTCCTTGATCCCAAGACTACATCAAAAATCCATGTTCTTGGTGACAAGTACCAGAGCAAATTGCTTGAAATAATTGATGCAAGTGAGTTGCCTGAGTTCTTAGGAGGTACTTGTACCTGTGTTGATCAAGGAGGCTGTATGCTTTCTGATAAGGGCCCATGGAAGGATGCCGAAATAATGAGGAAAGTTCAGAATGGTGATCATAAATGTTCGGTAAAAAGGGAGTCTCAGGCCATGGAAGAAAAGACAGGTTCTGAGGATGAGGTAGCGTATCCAAAGGCCCCTGCTACTAAGGCTTGCAACTACGAGGACTTTGCCCCACCTGCTAACAAAACAGTAGCAACATGGAAAAAAGTTGAGGACAATGACGGATGTGTAGCATCAAAAGCAGATGGTTACCCCATGGTTGATTCATGCAAGATTCATGAAAAAGTGAATTCCCAGATTTTCACTGGCATTATGGCCTTTGTTATGGGCATCATCACCATGGTCAGAATGACACGAAACATGCCCAAGAAGCTCACTGATGCCAACTTCTACTCCAATTCCGTTTATTCTGATGACACAATGTATAAAGGGCAGGTTCCTTCTGACCAATTACCTTCCCGTGGCATCTCTCATGCAGAGTACTTGAACGTGATGCAACGCATGGCTGAGTTGGAAGAGAGAATGATCAACAATATTAATAGACCTGTCACCATGCCACCTGAGAAAGAGGAAATGCTGAATGCCGCTATAAGACGAGCTGACGCATTGGAACAAGAACTCATGGCGACCAAGAAGGCTTTGGAGGATTCACTTGCCAAACAAGAGGAGCTTTCAGCTTATATCGAGAAAAGGAAGAAGAAGAAGAAGATGTTACTCTGGTAA 1647 0.4287 MKYNCCVMLAALQRPDVVGSLKKTAMNTSTKFRSSMSRKGRRSSKVMSLEIEDIHDEEEMKAVDAFRQALVLEELLPAKHDDYHVILRFLKARKFDIEKTKQMWSDMLQWRKEFGADTIMEDFDFKELSEVLQYYPQGHHGVDKDGRPVYIERLGQVDPTKLMQVTTMDRYIRYHVMEFERTFNMKFPACSIAAKKQIDQSTTILDVKGVGLKNFNKAARELITRLQKIDGDNYPETLNRMFIINAGSGFRMLWNTVKSFLDPKTTSKIHVLGDKYQSKLLEIIDASELPEFLGGTCTCVDQGGCMLSDKGPWKDAEIMRKVQNGDHKCSVKRESQAMEEKTGSEDEVAYPKAPATKACNYEDFAPPANKTVATWKKVEDNDGCVASKADGYPMVDSCKIHEKVNSQIFTGIMAFVMGIITMVRMTRNMPKKLTDANFYSNSVYSDDTMYKGQVPSDQLPSRGISHAEYLNVMQRMAELEERMINNINRPVTMPPEKEEMLNAAIRRADALEQELMATKKALEDSLAKQEELSAYIEKRKKKKKMLLW 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00570 548 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 16 539 - -
Bach10g00570 548 Coils Coil 501 532 - -
Bach10g00570 548 SMART sec14_4 127 298 IPR001251 -
Bach10g00570 548 FunFam SEC14 cytosolic factor 115 327 - -
Bach10g00570 548 Pfam CRAL/TRIO, N-terminal domain 79 106 IPR011074 -
Bach10g00570 548 Pfam CRAL/TRIO domain 133 295 IPR001251 -
Bach10g00570 548 PRINTS Cellular retinaldehyde-binding protein signature 287 296 - -
Bach10g00570 548 PRINTS Cellular retinaldehyde-binding protein signature 254 273 - -
Bach10g00570 548 PRINTS Cellular retinaldehyde-binding protein signature 85 107 - -
Bach10g00570 548 Gene3D - 41 114 - -
Bach10g00570 548 SMART CRAL_TRIO_N_2 82 107 IPR011074 -
Bach10g00570 548 SUPERFAMILY CRAL/TRIO N-terminal domain 56 123 IPR036273 -
Bach10g00570 548 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 127 301 IPR001251 -
Bach10g00570 548 Gene3D - 115 327 IPR036865 -
Bach10g00570 548 CDD SEC14 128 296 IPR001251 -
Bach10g00570 548 SUPERFAMILY CRAL/TRIO domain 127 321 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00570 Bach-Chr10 4052423 4057470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00570 61 292 Acyl Lipid Metabolism Gene Families AT5G47730 27.642 1.14e-19 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00570 K26544 - gmx:100785716 776.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g00570 10 4052423 4057470 Bach10g00570 10 4052423 4057470 ECH