Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00335 ATGGCTTCGAAGTCTGAACAAGAGCCACGTCCGCTACGTGCCTCTCTGGACATAGTAGAAGAAATCACCAGAGTCTATAGATCACTGCCACCTAGACCTTCCATTGAAGAGGTCGAAGCTGCCACTTCCACTGTAGAAACCGTGAACAGAGAGGAGCAAATGAAGCTCGATGAAATCTCGATGCAAGAAGTTCCTCATGACTTGTCCGAGGAGCTATTCTCTGTATTGCAGGACCTTAAGAAAACCGTGGTCGTGTTCCAGAACCATCAACAAAGGAGAGAGGCTCTCCACCTTCTTGAACAAGAGAACATGTTTAACACCTTTGGTGATCTTATTCAAAGGGCTTCTCAATTGGTTTCTGGGGATACCCAGGATAAGAAACATACCAATTTTGCCGAACCTACTGGGAAAATTGTTGCAGATGTTGTTATTAGTGATCAAAGTCTGGTGAAGAGACCGGAAGAAGAAGAACCACAGCATAAAAATTTCAACTTCGAAAAGGGGCTTCTCTCTGCAGGAGATGGGAACTGTGAAAAATTAAGTCTGATGAAAGTGGCAACCCTTATTGAAAACTATGGTAAGAGTGAAGCAACAATCCTTGGACTTAGAGGGAGATTGGTGGAGCAGATGGAGTGGTTGCCTTTATCAATAGGCAAACTATGTAATGTGACTGAGGTTGACTTGTCTGAAAACAGAATCATGGCTCTTCCAACCACCATTGGTGGTCTCAAGGCCTTAAAAAGGCTTGATCTTCACTCAAACCAACTCATAAACCTTCCTGATTTATTTGGAGAACTGATTAATCTCGCTGACCTTGACCTCCGAGCCAACAGATTGAAGTCACTACCAGCTTCTTTCGGAAATTTGATCAATCTCATTGATCTTGACTTGAGTTCAAATGAGTTCACACACTTACCAGAGACAATTGGGAACTTAAATAGCTTGAAGAGATTAAATCTCGAGACAAATGAGCTTGAGGAACTGCCCTACACAATTGGAGCTTGCACGTCACTCTCGGAGCTGAGGTTAGATTTCAATCAGCTCAAGGCCATTCCTGAGGCAATTGGGAAAATTGAATGCTTAGAGATTCTCACTCTGCACTATAACAGAATCAAGGGGCTGCCCACAACAATGGGTAATCTATGCAATTTGAAGGAACTTGATGTTAGCTTTAATGAACTCGAATCTGTACCAGAGAACCTGTGTTTTGCAGTAAATCTGAAGAAATTAAATGTGGGGAACAACTTCGCTGATTTAACAGCCTTGCCAAGATCAATAGGAAACCTTGAAATGCTTGAGGAGTTGGATATAAGTAATGATCAAATAATAGCATTACCAGAGTCTTTCAGATTCTTGTCCAAATTGAGAGTTTTTCGTGCTGATGAGACTCCTCTAGAGGTGCCACCAAGGGAAGTAGTCAAGCTGGGTGCACAGGAAGTTGTGCAGTCCATGGCTAATTTTGTCGCCAGGAAAGACACAACATCCACGAAAAAGGAGAAGAACAAGAAGAAGAAGAAAAAGGGATTTTGGCTCTGGTTTTGCTCAATATTTGGCCCTCGACAGAGATGATTCTGAAAAAACTATGATGTTTCTCGATTTACATGTTGTCCATTGGAACGCTTTGCTATTCCTAACGAACTGTTCTATAATTGTGGGTTTGCCGTGTGAATTTATGCTCTTCGTGTGATTTGCAAATATATGGAAATGGTTTGGTAACAGCACCATTGTACTCGTTTAC 1738 0.4206 MASKSEQEPRPLRASLDIVEEITRVYRSLPPRPSIEEVEAATSTVETVNREEQMKLDEISMQEVPHDLSEELFSVLQDLKKTVVVFQNHQQRREALHLLEQENMFNTFGDLIQRASQLVSGDTQDKKHTNFAEPTGKIVADVVISDQSLVKRPEEEEPQHKNFNFEKGLLSAGDGNCEKLSLMKVATLIENYGKSEATILGLRGRLVEQMEWLPLSIGKLCNVTEVDLSENRIMALPTTIGGLKALKRLDLHSNQLINLPDLFGELINLADLDLRANRLKSLPASFGNLINLIDLDLSSNEFTHLPETIGNLNSLKRLNLETNELEELPYTIGACTSLSELRLDFNQLKAIPEAIGKIECLEILTLHYNRIKGLPTTMGNLCNLKELDVSFNELESVPENLCFAVNLKKLNVGNNFADLTALPRSIGNLEMLEELDISNDQIIALPESFRFLSKLRVFRADETPLEVPPREVVKLGAQEVVQSMANFVARKDTTSTKKEKNKKKKKKGFWLWFCSIFGPRQR 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00335 522 Gene3D Ribonuclease Inhibitor 181 486 IPR032675 -
Bach10g00335 522 FunFam Plant intracellular Ras-group-related LRR protein 4 179 487 - -
Bach10g00335 522 Pfam Leucine rich repeat 337 394 IPR001611 GO:0005515
Bach10g00335 522 Pfam Leucine rich repeat 268 325 IPR001611 GO:0005515
Bach10g00335 522 SMART LRR_typ_2 312 335 IPR003591 -
Bach10g00335 522 SMART LRR_typ_2 220 242 IPR003591 -
Bach10g00335 522 SMART LRR_typ_2 336 357 IPR003591 -
Bach10g00335 522 SMART LRR_typ_2 429 451 IPR003591 -
Bach10g00335 522 SMART LRR_typ_2 243 265 IPR003591 -
Bach10g00335 522 SMART LRR_typ_2 358 380 IPR003591 -
Bach10g00335 522 SMART LRR_typ_2 266 288 IPR003591 -
Bach10g00335 522 SMART LRR_typ_2 289 311 IPR003591 -
Bach10g00335 522 SMART LRR_typ_2 381 404 IPR003591 -
Bach10g00335 522 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 179 292 - -
Bach10g00335 522 SMART LRR_bac_2 289 308 - -
Bach10g00335 522 SMART LRR_bac_2 266 285 - -
Bach10g00335 522 SMART LRR_bac_2 335 354 - -
Bach10g00335 522 SMART LRR_bac_2 312 331 - -
Bach10g00335 522 SMART LRR_bac_2 243 262 - -
Bach10g00335 522 SMART LRR_bac_2 404 425 - -
Bach10g00335 522 SMART LRR_bac_2 429 448 - -
Bach10g00335 522 SMART LRR_bac_2 381 400 - -
Bach10g00335 522 ProSiteProfiles Leucine-rich repeat profile. 383 404 IPR001611 GO:0005515
Bach10g00335 522 ProSiteProfiles Leucine-rich repeat profile. 245 266 IPR001611 GO:0005515
Bach10g00335 522 SUPERFAMILY L domain-like 198 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00335 Bach-Chr10 2332684 2334831 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00335 213 456 Receptor kinase-like Gene Family AT3G11080 29.200 9.02e-10 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00335 - - gmx:100798442 687.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g00335 10 2332684 2334831 Bach10g00335 10 2332684 2334831 ECH