Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00313 ATGTTATCAGGATATCTACAATCCGGAAGGCTGGTTGAGGCTTGTCAGTTTTCTGAAAAGATGCCAAATAGGAATGTTGTTTCGTGGACTGTAATGCTTTGTGGGTTAGCAGATGCGGTCAGCATTGAAGATGCAAGGAAATTGTTTGATGAAATGCCGGAGAAGAATTTCATGGAGATTGCTCAAGAGCTGCAGCTAAAACCTACAGATGGCGACAAAAAGCCGAACGAACTCAGTGACGCTTCTGTTCCCAAACAATCTCATCGTTCAACTCCAAGATTCAGAGAATACAAATGGTGGTTTCGTGTAACCGTCTACATTATCTTTCTTCTGGTGGGCCAATCTGCAGCTACTCTTTTGGGAAGGTTATACTATGATAAAGGTGGTAATAGTAAATGGATGGCAACACTTGTTCAATCGGCTGGATTCCCAGTTCTATTTCCTCTCCTTTTTTACTTCCCACCCAGTACCCAATTCACTAACATTTCCTCTGTCACCAAACCTAAAGTTTCAACCCTTGTTTTCCTCTACTTGGCTTTTGGCCTACTCTTGACAGGGGACAACATGATGTATTCCTATGGACTTCTTTACCTCCCTGTTTCTACTTATTCTCTGCTATGTGCAACCCAATTGGCCTTTAATGCACTATTCTCTTTCTTCCTTAATTCACATAAGTTCACACCAGTCATATTCAATTCTTTGGTTCTCCTCACCATATCAGCTTCCCTGCTTGCAGTAAATTCTGATTCTGAGGAATCAACAGAAGAGACCAGAGGAAAGTATGTTATTGGGTTCCTATGCACACTTGGTGCATCTGCTACATATTCTTTATATCTCTCTCTTGTGCAGCTTTCCTTTGAGAAAGTCATAAAATCAGAGACCTTCTCTGCTGTATTGGATATGCAATTGTACCCATCTTTCGTTGCGAGCTGTGCTTGCGTTGTAGGGCTTTTTGCAAGTGGAGAATGGAAAACTTTGGAGAAGGAGATGGAGGAATACCAAAAGGGAAGGGTGTCGTATGTGATGACTCTGCTTTGGACTGCTGTTACATGGCAAATCTCTTCTGTAGGTTTGTTGGGTCTGATTTTTGAGGCATCTTCTTTGTTCTCTAATGTAATAAGTACTCTGGCGTTGCCTACTGTGCCCATTCTTGCAGTTGTGTTCTTTCATGACAAGCTCAATGGGGTGAAGGTGATATCCTTGCTGTTGGCACTGTGGGGCTTTCTTTCCTACATTTATCAACATTATCTCGATGACTTCAAAGCCAAGGCAGACAGAAGAGATGGAATTGAGGTTTCTCGTGGTCACATAGAGATTTGTTAA 1323 0.4203 MLSGYLQSGRLVEACQFSEKMPNRNVVSWTVMLCGLADAVSIEDARKLFDEMPEKNFMEIAQELQLKPTDGDKKPNELSDASVPKQSHRSTPRFREYKWWFRVTVYIIFLLVGQSAATLLGRLYYDKGGNSKWMATLVQSAGFPVLFPLLFYFPPSTQFTNISSVTKPKVSTLVFLYLAFGLLLTGDNMMYSYGLLYLPVSTYSLLCATQLAFNALFSFFLNSHKFTPVIFNSLVLLTISASLLAVNSDSEESTEETRGKYVIGFLCTLGASATYSLYLSLVQLSFEKVIKSETFSAVLDMQLYPSFVASCACVVGLFASGEWKTLEKEMEEYQKGRVSYVMTLLWTAVTWQISSVGLLGLIFEASSLFSNVISTLALPTVPILAVVFFHDKLNGVKVISLLLALWGFLSYIYQHYLDDFKAKADRRDGIEVSRGHIEIC 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00313 440 Pfam PPR repeat 27 57 IPR002885 -
Bach10g00313 440 Gene3D Tetratricopeptide repeat domain 1 69 IPR011990 GO:0005515
Bach10g00313 440 PANTHER OS09G0467300 PROTEIN-RELATED 92 423 IPR030182 GO:0015211|GO:0016020
Bach10g00313 440 Pfam Purine nucleobase transmembrane transport 102 419 - -
Bach10g00313 440 SUPERFAMILY Multidrug resistance efflux transporter EmrE 143 248 - -
Bach10g00313 440 NCBIfam pentatricopeptide repeat 27 57 IPR002885 -
Bach10g00313 440 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 25 59 IPR002885 -
Bach10g00313 440 MobiDBLite consensus disorder prediction 68 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00313 Bach-Chr10 2203317 2205697 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00313 68 427 Organic Solute Cotransporters AT4G18220 55.923 9.02e-138 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00313 - - gmx:100819773 544.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g00313 10 2203317 2205697 Bach10g00313 10 2203317 2205697 ECH