Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00307 ATGGCGGAATCGATCGAGTTGCCAAGTCGCTTAGCCATCCTTCCTTTCATGAACAAGGTCCTCTTACCAGGCGCAATCGTCAGAATTCGTTGCACTTCGCCAAGCAGTGTAAAGTTGGTGGAACGAGAACTTTGGCAGCAAGAAGAGAAGGGATTGATTGGCATCCTGCCAGTACGTGATGCTGCTGAAATCAAAACACTGACTACCACAATATCTAATGAAACGGATTCGGTTGACCATGGCTCAAAAATTGAACGTGGTTCATCAGATTCTCGTAAGCTCAATATTAAAAGTCAGAGTGATGTTGTTCATTGGCATGCCAGGGGTGTTGCTGCTAGAGCATTACATTTATCTAGGGGAGTGGAGAAACCTAGTGGAAGGGTCACATATACAGTTGTTCTCGAAGGGTTGTGCAGATTTAGTGTTCAGGAACTAAGCACAAGAGGAACATACCATACTGCGAGGATCTCTTCCCTAGAGCTGACGAAGACTGAGATGGAGCAAGTTGAACAAGATCCAGACTTCTTAATGTTGTCTCGCCAATTCAAAGCAACTGCCATGGAGCTTATTTCTGTTCTGGAGCAGAAACAAAAAACTGCTGGAAGGACTAAAGTTCTTTTGGAGACGGTTCCAGTTGAGAAGTTGGCTGATATATTTGTTGCTAGCTTTGAGATAAGTTTTGAAGAACAGCTATCTATGTTGGATTCGGTTGATCCTAAAGTCAGGCTTTCGAAAGCAACTGACTTAGTTGATAGGCACTTACAGTCAATACGAGTAGCTGAGAAAATTACACAAAAGGTTGAAGGACAATTGTCAAAATCACAGAAAGAATTTCTTCTGCGTCAACAGATGAAAGCTATTAAAGAGGAGCTTGGTGATAATGATGACGATGAGGATGATTTGGCTGCCCTTGAAAGAAAGGTGCAAAGTGCGGGAATGCCACAGAATATTTGGAAGCATGCACACAGGGAGTTAAGGAGACTTCAAAAAATGCAGCCTCAGCAACCTGGGTATAACAGTTCTCGTGTTTACCTGGAGCTTCTTGCTGATCTGCCTTGGCAGAAGGCCAGTGAAGAGCATGAATTGGGCTTAAGAGCTGCTCAGGATCGACTTGACAGTGATCACTATGGATTAGTGAAGGTCAAGCAACGGATAATTGAATACCTTGCTGTGCGGAAGCTTAAGCCAGATGCAAGGGGTACTGTGTTGTGCTTTGTTGGTCCACCAGGTGTTGGGAAAACATCGTTGGCATCTTCTATTGCTGCTGCTTTGGGTAGAAAATTTGTGCGCATTTCCCTTGGTGGAGTCAAGGATGAGGCTGATATTAGAGGACATAGGAGAACATACATTGGAAGCATGCCTGGGCGCCTTATTGAGGGTTTGAAGAGAGTAGCTGTTTGCAATCCCGTCATGTTGCTGGATGAAATTGACAAGACGGGGTCAAATGTTCGTGGAGATCCAGCTTCAGCATTGCTAGAGGTTCTTGATCCAGAACAAAATAAAACATTCAATGATCATTATCTGAATGTTCCATTTGATCTATCCAAGGTGGTTTTTGTGGCAACAGCAAATAGCGTGCAGCCTATTCCTCCGCCACTCCTTGACAGGATGGAGGTCATTGCTCTGCCTGGATATACTCCTGAAGAAAAGCTCAGTATAGCCATGCGGCATTTGATTCCAAGAGTTATGGACCAGCATGGGTTGAGCTCTGAATTTCTTCAGATTCCAAAGGCAATGGTGAAACTTATTATTCGGAGATATACAAGAGAAGCTGGTGTGCGGAATTTAGAAAGGAATTTGGCTGCCTTGGCTCGTGCTGCTGCAGTGAGCGTTGCAGAACAAGAACAAGCAGTTCCACTAAACAAAGAAATGCAGGGACTCACTACACCACTGCCGGAAAACAGACTTGCTGATTGTGCTGAAGTTGAAATGGAGGTGATGTCGATGGGCGTAAATAATCGCGACATTTCAAACACATTAAGAATTGCCTCTTCACTGGTTGTGGACGAAGCAATGCTCGAAAAAGTGCTTGGGCCTCCAAGATATGATGACACAGAAGTTGCAGGACGTGTTGCAACCCCTGGTGTCTCTGTTGGGCTAACCTGGACTGCTTTTGGCGGAGAAGTTCAGTTTGTGGAGGCTACAGCAATGGTGGGGAAGGGTGAATTACATCTCACTGGACAACTTGGTGATATAATTAAAGAATCGGCTCAGATTGCACTAACTTGGGTTAGGGCAAGGGCAACTGACCTTAGGCTGGCTGCTGCAGAGGGGATTAATCTGTTGGAGGGCCGTGATATACATATACATTTTCCTGCTGGTGATGTACCTAAAGATGGACCCTCAGCAGGTGTAACTTTAGTGACAGCATTAGTGTCACTTTTCAGTCAGAAAAGAGTGAGGTCAGACACAGCTATGACTGGAGAGATGACATTGAGGGGTCTTATACTACCTGTTGGTGGTGTCAAGGATAAGATATTAGCCGCTCACCGACATGGTATTAAGAGGGTCATCCTGCCTGAAGGGAACTTGAAGGACTTGGTTGGAGTGCCATCATCAGTGCTAGCCAATTTGGAGATACTGCTTGCGAAGCGAATGGAAGATGTGTTAGAACATGCTTTTGATGGAGGGTACCCTTGGAGGCAACACTCAAAATTATGACACGGATCATTGAATAAAATTTATTGTACATCCTTGTGATTCAATCAACTCTTCACATGGCATCCATTCAACCCCGCGGCTGTCAATCGGGAAACTGGAGAGTGGCAAAACTCAAGAGCCAAGCATTACATCGTTGGACCTCCAGGCTTCA 2812 0.4499 MAESIELPSRLAILPFMNKVLLPGAIVRIRCTSPSSVKLVERELWQQEEKGLIGILPVRDAAEIKTLTTTISNETDSVDHGSKIERGSSDSRKLNIKSQSDVVHWHARGVAARALHLSRGVEKPSGRVTYTVVLEGLCRFSVQELSTRGTYHTARISSLELTKTEMEQVEQDPDFLMLSRQFKATAMELISVLEQKQKTAGRTKVLLETVPVEKLADIFVASFEISFEEQLSMLDSVDPKVRLSKATDLVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMKAIKEELGDNDDDEDDLAALERKVQSAGMPQNIWKHAHRELRRLQKMQPQQPGYNSSRVYLELLADLPWQKASEEHELGLRAAQDRLDSDHYGLVKVKQRIIEYLAVRKLKPDARGTVLCFVGPPGVGKTSLASSIAAALGRKFVRISLGGVKDEADIRGHRRTYIGSMPGRLIEGLKRVAVCNPVMLLDEIDKTGSNVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVVFVATANSVQPIPPPLLDRMEVIALPGYTPEEKLSIAMRHLIPRVMDQHGLSSEFLQIPKAMVKLIIRRYTREAGVRNLERNLAALARAAAVSVAEQEQAVPLNKEMQGLTTPLPENRLADCAEVEMEVMSMGVNNRDISNTLRIASSLVVDEAMLEKVLGPPRYDDTEVAGRVATPGVSVGLTWTAFGGEVQFVEATAMVGKGELHLTGQLGDIIKESAQIALTWVRARATDLRLAAAEGINLLEGRDIHIHFPAGDVPKDGPSAGVTLVTALVSLFSQKRVRSDTAMTGEMTLRGLILPVGGVKDKILAAHRHGIKRVILPEGNLKDLVGVPSSVLANLEILLAKRMEDVLEHAFDGGYPWRQHSKL 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00307 886 FunFam Lon protease homolog 2, peroxisomal 170 295 - -
Bach10g00307 886 Hamap Lon protease homolog 2, peroxisomal [LONP2]. 3 886 IPR027501 GO:0004252|GO:0006515
Bach10g00307 886 FunFam Lon protease homolog 302 351 - -
Bach10g00307 886 Coils Coil 287 307 - -
Bach10g00307 886 PIRSF Lon_proteas 1 629 IPR004815 GO:0004176|GO:0005524|GO:0006508
Bach10g00307 886 PIRSF Lon_proteas 643 877 IPR004815 GO:0004176|GO:0005524|GO:0006508
Bach10g00307 886 NCBIfam endopeptidase La 13 874 IPR004815 GO:0004176|GO:0005524|GO:0006508
Bach10g00307 886 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 351 615 IPR027417 -
Bach10g00307 886 Pfam ATPase family associated with various cellular activities (AAA) 403 540 IPR003959 GO:0005524|GO:0016887
Bach10g00307 886 SMART AAA_5 399 544 IPR003593 GO:0016887
Bach10g00307 886 CDD RecA-like_Lon 364 545 - -
Bach10g00307 886 Gene3D - 2 160 IPR046336 -
Bach10g00307 886 PANTHER ATP DEPENDENT LON PROTEASE FAMILY MEMBER 8 882 IPR027065 GO:0004176|GO:0004252|GO:0005524|GO:0030163
Bach10g00307 886 SMART lon_5 10 252 IPR003111 -
Bach10g00307 886 FunFam Lon protease homolog 2, peroxisomal 688 879 - -
Bach10g00307 886 Gene3D - 171 295 - -
Bach10g00307 886 ProSiteProfiles Lon proteolytic domain profile. 691 876 IPR008269 GO:0004176|GO:0004252|GO:0006508
Bach10g00307 886 ProSitePatterns ATP-dependent serine proteases, lon family, serine active site. 779 787 IPR008268 GO:0004176|GO:0004252|GO:0006508
Bach10g00307 886 Pfam ATP-dependent protease La (LON) substrate-binding domain 11 251 IPR003111 -
Bach10g00307 886 FunFam Lon protease homolog 2, peroxisomal 364 542 - -
Bach10g00307 886 Gene3D - 303 351 - -
Bach10g00307 886 Gene3D - 543 682 - -
Bach10g00307 886 Gene3D - 364 542 IPR027417 -
Bach10g00307 886 SUPERFAMILY Ribosomal protein S5 domain 2-like 694 874 IPR020568 -
Bach10g00307 886 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 829 847 - -
Bach10g00307 886 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 694 710 - -
Bach10g00307 886 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 776 795 - -
Bach10g00307 886 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 407 426 - -
Bach10g00307 886 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 806 825 - -
Bach10g00307 886 ProSiteProfiles Lon N-terminal domain profile. 11 252 IPR003111 -
Bach10g00307 886 Gene3D - 693 879 IPR014721 -
Bach10g00307 886 Pfam Lon protease (S16) C-terminal proteolytic domain 668 874 IPR008269 GO:0004176|GO:0004252|GO:0006508
Bach10g00307 886 SUPERFAMILY PUA domain-like 10 251 IPR015947 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00307 Bach-Chr10 2139576 2147499 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00307 K01338 - gmx:100789982 1492.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach10g00307 10 2139576 2147499 Bach10g00307 10 2139576 2147499 ECH