Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach10g00305 ATGGCTGTTCAAGCTCAATACCCATCCAATGTCCTCCTTCTAAACAGAAACGTACAAGAAGGACATGACTATTCATTACAACCTCAACCAGGAGGAGTACTGCTTGATCAATCCCATATGTTACTCAACAATGGAGGTACTAATTCACGCAAGAGAGGAAGGGAATCTACAAATGCCACCGGGATTGCCCAAACAGCCACTAATGTTATTAATCCATTCTCTATGCAGTCCCAGCCTCCTCAGCTTATAGACCTCTCTCAGCTCCACAATCAGCCACAAAATGTGGTCTCCACCGGTCTCCGTTTATCGTTCGGTGACCAACAACAACAACGACTGCAATTACAGCGGCAACAACAACACCAACAACATGGGTCTCACTCCTCTGCTTTCATATCTCCATTATCTGAAGGATTAGCATCCCAAATCAAACAACAGAGAGACGAAATTGACCAGTTCCTTTATGCTCAGGGAGAGCAACTGCGGCGGGCATTAGCAGAGAAGAAGCATAGACATTACCATGCGCTACTCAGCCTAGCGGAAGAATCAGTGGCAAAACGGTTGAAAGAGAAGGAGGTGGAGGTTGGAAAAGCTACGCGCAGGAACGCCGAGTTAGAGGCACGCGCAGCACAACTTAGCATGGAAGTGCAGTTTTGGCAGGCCAAGGCTAAAGCACAAGAGGCAACAGCTACATCATTACAAGCGCAATTGCAGCAGGCTATTATGAGCGGTACAGCAATGGGTGGCCAAGACAAAAGGGGTGGCGGTTGTGTCGCTGAAAACGGTGGTTTAGCATGCGCGGTGGGTGAAGAGGGACAAGCCGAGGATGCCGAGTCGGCTTATGTTGATCCGGACCGACTCGTGTTATCAGGACCAAAATGTAGAGGTTGTGGAAAGCGAGTTGCTTCGGTGGTGGTGTTGCCGTGTCGGCACCTATGCATCTGTACAGAATGTGACCCACAATTCCGAGCGTGCCCGGTCTGCCTCACCGTGAAAAATTCAACCGTTGAAGTCAATCTATCTTAG 1023 0.4907 MAVQAQYPSNVLLLNRNVQEGHDYSLQPQPGGVLLDQSHMLLNNGGTNSRKRGRESTNATGIAQTATNVINPFSMQSQPPQLIDLSQLHNQPQNVVSTGLRLSFGDQQQQRLQLQRQQQHQQHGSHSSAFISPLSEGLASQIKQQRDEIDQFLYAQGEQLRRALAEKKHRHYHALLSLAEESVAKRLKEKEVEVGKATRRNAELEARAAQLSMEVQFWQAKAKAQEATATSLQAQLQQAIMSGTAMGGQDKRGGGCVAENGGLACAVGEEGQAEDAESAYVDPDRLVLSGPKCRGCGKRVASVVVLPCRHLCICTECDPQFRACPVCLTVKNSTVEVNLS 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach10g00305 340 Pfam Zinc finger, C3HC4 type (RING finger) 292 329 - -
Bach10g00305 340 PIRSF SBP1_RNase_bind 1 340 IPR017066 -
Bach10g00305 340 FunFam probable BOI-related E3 ubiquitin-protein ligase 2 275 339 - -
Bach10g00305 340 Coils Coil 187 221 - -
Bach10g00305 340 ProSiteProfiles Zinc finger RING-type profile. 293 327 IPR001841 -
Bach10g00305 340 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 43 337 IPR017066 -
Bach10g00305 340 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 269 339 IPR013083 -
Bach10g00305 340 CDD mRING-HC-C3HC5_CGRF1-like 291 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach10g00305 Bach-Chr10 2122742 2124102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach10g00305 293 329 Miscellaneous Gene Families AT2G21380 37.838 6.14e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach10g00305 K19042 - qsa:O6P43_024439 454.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach4g00348 4 2251050 2252813 Bach10g00305 10 2122742 2124102 BWGD
Bach10g00305 10 2122742 2124102 Bach10g00305 10 2122742 2124102 ECH